We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SEPT9
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:53.4TPM
GTEx:17.8RPKM
FANTOM5:135.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA042564

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 

BREAST - HPA RNA-seq

Average TPM

53.4

overview Female, age 52
Sample 1
TPM: 69.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 49.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 51.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 42.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

17.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 17.8
Samples: 214

Max RPKM: 34.2
Min RPKM: 6.8
Std RPKM: 4.9
Median RPKM: 17.8
GTEX-T2IS-1526-SM-32QPR 34.2
GTEX-13O3O-0826-SM-5K7WE 29.6
GTEX-S341-1526-SM-4AD6K 28.6
GTEX-U8XE-0826-SM-4E3J1 28.1
GTEX-11TUW-1826-SM-5BC5D 27.7
GTEX-11P7K-0726-SM-5EGKX 26.9
GTEX-11EM3-1326-SM-5N9C6 26.4
GTEX-1269C-2426-SM-5FQSN 26.4
GTEX-131XW-0726-SM-5EGK3 26.3
GTEX-11WQC-1726-SM-5GU4W 26.0
GTEX-X4EP-2926-SM-3P5YQ 25.8
GTEX-ZEX8-2226-SM-57WC6 25.8
GTEX-SE5C-2126-SM-4BRUJ 25.7
GTEX-R3RS-0626-SM-48FE1 25.3
GTEX-XOT4-0726-SM-4GIAW 25.3
GTEX-ZY6K-1626-SM-5GZWV 25.2
GTEX-SIU7-1626-SM-4BRUK 25.1
GTEX-ZV7C-1826-SM-5NQ83 25.1
GTEX-XUZC-1626-SM-4BRVP 24.9
GTEX-11TT1-2126-SM-5GU5Y 24.7
GTEX-ZF29-1926-SM-5S2P1 24.6
GTEX-U3ZN-1926-SM-4DXSG 24.3
GTEX-U3ZH-1426-SM-4DXSR 24.1
GTEX-X15G-1626-SM-3NMB3 24.1
GTEX-ZLV1-1426-SM-4WWES 24.0
GTEX-13NZ9-1026-SM-5MR5K 23.9
GTEX-QVJO-1826-SM-447C9 23.8
GTEX-T5JW-2026-SM-4DM63 23.8
GTEX-133LE-1726-SM-5K7VQ 23.7
GTEX-UJHI-1426-SM-3DB9C 23.4
GTEX-ZF2S-2026-SM-5E461 23.4
GTEX-11GS4-2126-SM-5A5KR 23.2
GTEX-X261-0626-SM-3NMD9 23.2
GTEX-ZXES-0826-SM-5E43C 23.1
GTEX-11EQ9-1826-SM-5Q5AJ 22.8
GTEX-11EI6-0626-SM-5985T 22.6
GTEX-13NZ8-0126-SM-5IJCT 22.6
GTEX-S4P3-1326-SM-4AD6V 22.3
GTEX-ZC5H-2626-SM-5J2MG 22.3
GTEX-RWS6-1926-SM-47JXY 22.0
GTEX-YJ8O-2226-SM-5IFHW 22.0
GTEX-XUW1-2326-SM-4BOO5 21.9
GTEX-VUSG-2226-SM-4KKZO 21.8
GTEX-YFC4-1426-SM-5IFJG 21.8
GTEX-RUSQ-2026-SM-4GIAK 21.7
GTEX-131YS-0626-SM-5EGKL 21.6
GTEX-WYBS-0926-SM-3NM94 21.6
GTEX-11EMC-2026-SM-5A5JV 21.4
GTEX-12WSK-2226-SM-5GCO5 21.4
GTEX-ZVE2-1226-SM-5NQ8R 21.3
GTEX-11OF3-1926-SM-59889 21.2
GTEX-1399U-1826-SM-5PNZ1 21.2
GTEX-QDT8-0626-SM-48TYW 21.2
GTEX-Y111-2026-SM-4SOJA 21.2
GTEX-XYKS-1326-SM-4BRUN 21.1
GTEX-13O3Q-2226-SM-5KM4O 21.0
GTEX-11PRG-0826-SM-5EQ6A 20.9
GTEX-Q2AG-0326-SM-48U1O 20.8
GTEX-13NZB-2126-SM-5MR4Y 20.7
GTEX-11DXW-0626-SM-5N9ER 20.6
GTEX-T5JC-2126-SM-32PMO 20.5
GTEX-11DXY-2326-SM-5GICW 20.3
GTEX-139TU-0626-SM-5KM3X 20.3
GTEX-13QIC-2326-SM-5LU5N 20.3
GTEX-UPK5-2326-SM-3P5Z8 20.3
GTEX-1313W-0826-SM-5EQ4T 20.2
GTEX-Y114-2026-SM-4TT7L 20.2
GTEX-ZVT4-1026-SM-57WC4 20.2
GTEX-13FHO-0826-SM-5L3E8 20.0
GTEX-U412-1826-SM-4DXTJ 20.0
GTEX-Y3IK-2326-SM-4WWDT 20.0
GTEX-13W3W-1226-SM-5LU4H 19.9
GTEX-14AS3-1626-SM-5S2OY 19.8
GTEX-WXYG-2226-SM-4E3IM 19.8
GTEX-XBED-1626-SM-47JYN 19.8
GTEX-146FH-0826-SM-5SI8T 19.6
GTEX-QEG5-0726-SM-4R1JQ 19.6
GTEX-Y8LW-1626-SM-5IFHX 19.6
GTEX-WI4N-1426-SM-3LK7H 19.5
GTEX-WYJK-1326-SM-3NB2T 19.5
GTEX-ZTX8-1226-SM-4YCE9 19.5
GTEX-T6MN-0726-SM-32PML 19.4
GTEX-WOFL-0826-SM-3MJG1 19.4
GTEX-ZZPU-0626-SM-5E43T 19.3
GTEX-132AR-0826-SM-5EGK6 19.2
GTEX-13S86-1226-SM-5S2OA 19.2
GTEX-XMD2-0926-SM-4WWEF 19.2
GTEX-XUJ4-1926-SM-4BOOV 19.2
GTEX-13PL6-2926-SM-5L3I2 19.1
GTEX-ZAJG-0626-SM-5HL8X 19.1
GTEX-RU72-0626-SM-46MUI 18.9
GTEX-12WSB-0626-SM-59HJO 18.8
GTEX-13CF2-2026-SM-5K7VI 18.8
GTEX-S7SE-0826-SM-4AT4D 18.8
GTEX-ZU9S-1926-SM-5NQBP 18.8
GTEX-1122O-1226-SM-5H113 18.7
GTEX-ZUA1-1526-SM-59HLS 18.7
GTEX-13D11-1026-SM-5IJFB 18.5
GTEX-13FTY-2226-SM-5J1ND 18.5
GTEX-145LT-0726-SM-5S2VM 18.3
GTEX-1192X-2326-SM-5987X 18.2
GTEX-13W46-0826-SM-5LU3H 18.1
GTEX-11P81-1926-SM-5BC53 18.0
GTEX-12ZZX-1126-SM-5EGKB 18.0
GTEX-11GSO-1926-SM-5A5K3 17.9
GTEX-ZVTK-0326-SM-51MRR 17.9
GTEX-11I78-2226-SM-5PNYA 17.8
GTEX-13OW5-2226-SM-5L3HC 17.8
GTEX-WYVS-1726-SM-3NMAY 17.8
GTEX-ZVT2-1826-SM-5NQ8W 17.8
GTEX-139T8-0826-SM-5L3DE 17.7
GTEX-WRHU-0326-SM-3MJFY 17.7
GTEX-ZF3C-2326-SM-5S2MZ 17.7
GTEX-13O3P-0826-SM-5L3DH 17.5
GTEX-147F4-2826-SM-5NQBN 17.5
GTEX-TMMY-0726-SM-33HBE 17.5
GTEX-S4UY-0726-SM-4AD6X 17.4
GTEX-11O72-2126-SM-5N9FO 17.3
GTEX-TML8-1226-SM-32QON 17.2
GTEX-ZTTD-1026-SM-51MRD 17.2
GTEX-13N11-1726-SM-5J1OJ 17.1
GTEX-1117F-2826-SM-5GZXL 17.0
GTEX-Y5V5-2126-SM-4WWFO 17.0
GTEX-11NV4-2026-SM-5N9DG 16.8
GTEX-T6MO-0326-SM-32QOK 16.8
GTEX-ZDXO-0126-SM-5S2ND 16.8
GTEX-111YS-1926-SM-5GICC 16.7
GTEX-11DZ1-0326-SM-5N9BN 16.6
GTEX-1211K-1926-SM-5EQLB 16.4
GTEX-132Q8-1426-SM-5EGK7 16.4
GTEX-X4XY-0926-SM-4E3JD 16.4
GTEX-11NSD-0926-SM-5N9DR 16.3
GTEX-13113-1726-SM-5GCOO 16.3
GTEX-1314G-1226-SM-5BC6D 16.3
GTEX-145MN-1926-SM-5SIAI 16.3
GTEX-QEL4-2126-SM-447AE 16.2
GTEX-11WQK-2426-SM-5GU5C 16.1
GTEX-R55D-0826-SM-48FEA 16.1
GTEX-ZVZQ-0826-SM-51MRF 16.1
GTEX-13OW8-0226-SM-5K7UP 15.9
GTEX-117XS-1926-SM-5GICO 15.8
GTEX-XV7Q-2326-SM-4BRVZ 15.6
GTEX-ZYWO-2326-SM-5GZY4 15.5
GTEX-S32W-2026-SM-4AD6E 15.3
GTEX-TKQ1-0226-SM-33HB5 15.3
GTEX-Y3I4-1526-SM-4TT7K 15.3
GTEX-ZYT6-0126-SM-5E45J 15.2
GTEX-11LCK-2426-SM-5HL5F 15.1
GTEX-12WSM-1726-SM-5BC6J 14.9
GTEX-14ABY-2126-SM-5QGQZ 14.9
GTEX-S4Q7-1126-SM-4AD6R 14.9
GTEX-XQ3S-1326-SM-4BOPQ 14.9
GTEX-11DXZ-1926-SM-5GZZL 14.8
GTEX-144GL-2026-SM-5LU3O 14.8
GTEX-VJWN-0726-SM-3GIJ8 14.7
GTEX-Y5LM-1726-SM-4VDSX 14.7
GTEX-Y8E4-1626-SM-5S2MW 14.7
GTEX-T2YK-2226-SM-32QPT 14.5
GTEX-XQ8I-2426-SM-4WAXY 14.5
GTEX-S33H-0326-SM-4AD6N 14.4
GTEX-ZWKS-2826-SM-5NQ74 14.4
GTEX-144GM-0926-SM-5O994 14.3
GTEX-14E6E-1326-SM-5S2NR 14.2
GTEX-ZYFC-0826-SM-5E44K 14.2
GTEX-11ONC-2126-SM-5HL6E 14.1
GTEX-13FTW-1426-SM-5LZWZ 13.9
GTEX-R55F-1726-SM-2TF4R 13.9
GTEX-YFCO-1826-SM-4W1YH 13.9
GTEX-ZV6S-1826-SM-5NQ8D 13.9
GTEX-XMD1-0826-SM-4AT52 13.8
GTEX-12WSN-1326-SM-5GCNT 13.7
GTEX-ZAB4-2526-SM-5HL8M 13.6
GTEX-WY7C-2726-SM-3NB3P 13.5
GTEX-REY6-2426-SM-48FF5 13.4
GTEX-145MO-0826-SM-5NQBL 13.3
GTEX-ZDTT-2126-SM-5S2OJ 13.3
GTEX-YB5E-1726-SM-5IFJ3 13.2
GTEX-11ZUS-0826-SM-5FQUY 13.1
GTEX-14753-2426-SM-5LU8U 13.1
GTEX-R53T-1526-SM-48FEK 13.1
GTEX-W5X1-2326-SM-3GIL6 13.1
GTEX-13PVQ-1026-SM-5KM3M 13.0
GTEX-132NY-0826-SM-5K7Y7 12.9
GTEX-ZDYS-1126-SM-5K7UB 12.8
GTEX-XGQ4-0926-SM-4AT4U 12.7
GTEX-YB5K-1626-SM-5IFIN 12.1
GTEX-QMRM-1626-SM-4R1KV 12.0
GTEX-ZPIC-1126-SM-5BC7F 12.0
GTEX-117YX-1426-SM-5H12H 11.6
GTEX-13CF3-2126-SM-5IFJP 11.6
GTEX-TKQ2-1826-SM-33HB2 11.6
GTEX-YEC3-1026-SM-5IFI5 11.4
GTEX-13FTX-1126-SM-5N9EN 11.3
GTEX-139T6-1626-SM-5PNYZ 11.2
GTEX-ZYW4-0826-SM-5GIDG 11.0
GTEX-Y5V6-2126-SM-4WWFX 10.4
GTEX-WFON-1826-SM-3GILG 10.2
GTEX-PSDG-1626-SM-48TCQ 10.0
GTEX-12KS4-0126-SM-5Q5A5 9.8
GTEX-13O61-1826-SM-5KM4I 9.8
GTEX-11ZTT-2326-SM-5EQLG 9.6
GTEX-ZT9W-2026-SM-51MRA 9.6
GTEX-ZZ64-1226-SM-5E43R 9.4
GTEX-13N1W-0626-SM-5MR4U 9.2
GTEX-Y9LG-1426-SM-5IFJZ 9.0
GTEX-ZQG8-0726-SM-5P9H9 8.9
GTEX-ZA64-1526-SM-5CVMD 8.7
GTEX-XMK1-1126-SM-4IHJ8 8.6
GTEX-145ME-1526-SM-5Q5F2 8.4
GTEX-ZQUD-1926-SM-51MSA 8.4
GTEX-ZLFU-2126-SM-4WWEV 8.0
GTEX-12BJ1-1826-SM-5HL9N 7.9
GTEX-UTHO-1026-SM-3GAF7 7.7
GTEX-11P82-1326-SM-5HL62 6.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

135.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 135.1
FF:10080-102A8 77 years, female 135.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.