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Term
Gene name

Class

Subclass

Chromosome

External id

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Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA003505   HPA003881   sc-28313  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

  PBX3 - ENSG00000167081 [81%]
   

Released in version

4   4   4  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 
Immunocytochemistry

Supported   Approved   Supported  
Immunohistochemistry

Supported   Supported   Supported  
Western blot

Supported   Supported   Uncertain  
Protein array

Supported   Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Standard validation

Supported   Approved   Supported  

     

Figure description

Immunofluorescent staining of human cell line U-251 MG shows localization to nucleoplasm.   Immunofluorescent staining of human cell line U-251 MG shows localization to nucleoplasm.   Immunofluorescent staining of human cell line U-251 MG shows localization to nucleoplasm.  

Antibody dilution

1:42   1:10   1:13  

Literature conformity

The subcellular location is supported by literature.   The subcellular location is partly supported by literature or no literature is available.   The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human pancreas shows strong nuclear positivity in exocrine glandular cells.   Immunohistochemical staining of human adrenal gland shows strong nuclear positivity in cortical cells.   Immunohistochemical staining of human fallopian tube shows nuclear positivity in glandular cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 55 cell types
  RNA: detected in 37 tissues
Protein: detected in 51 cell types
  RNA: detected in 37 tissues
Protein: detected in 45 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:150   1:50   1:50  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

     

Figure description

Lane 1: Marker [kDa] 220, 112, 84, 47, 32, 26, 16.8
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 110, 82, 49.3, 32.2, 25.5, 17.6
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

46.6, 46.3, 38.4, 37, 18.2   47.2, 46.6, 46.3, 39.2, 37.1, 35.2   46.6, 46.3, 38.4, 37.1, 37, 35.2, 28.9, 18.2, 17.6, 15.6, 14.3, 10.5, 7.4  

Antibody dilution

1:250   1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000   1:2000    

ANTIGEN INFORMATION

 
 

Antibody HPA003505

 

Antibody HPA003881

 

Antibody CAB018768

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Not known  

Length (aa)

113   144    

Antigen sequence

PRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTIT
DQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQ
LMRLDNMLLAEGV
 
YSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEA
NIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSSFNMSNSGDLFMSVQS
LNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSP
   

Matching transcripts

PBX1-001 - ENSP00000405890 [100%]
PBX1-002 - ENSP00000356872 [100%]
PBX1-007 - ENSP00000341455 [100%]
PBX1-012 - ENSP00000453188 [100%]
PBX1-020 - ENSP00000485692 [100%]
  PBX1-001 - ENSP00000405890 [100%]
PBX1-017 - ENSP00000452727 [100%]
PBX1-020 - ENSP00000485692 [100%]
PBX1-201 - ENSP00000439943 [100%]
   

Other gene match

  PBX3 - ENSG00000167081 [81%]
   
ANTIGEN VIEW
PBX1-001
PBX1-002
PBX1-007
PBX1-012
PBX1-017
PBX1-020
PBX1-201
 

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