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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:47.9TPM
GTEx:23.2RPKM
FANTOM5:94.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA023033

 

Antibody HPA023034

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

47.9

overview Male, age 65
Sample 1
TPM: 56.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 42.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 41.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 52.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

23.2

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 23.2
Samples: 88

Max RPKM: 53.2
Min RPKM: 5.1
Std RPKM: 10.9
Median RPKM: 23.1
GTEX-YB5E-1526-SM-5IFIE 53.2
GTEX-YF7O-1826-SM-5IFIU 46.9
GTEX-XUZC-1426-SM-4BRV3 43.8
GTEX-ZYFG-2026-SM-5E43Y 42.9
GTEX-1122O-1326-SM-5H11F 42.7
GTEX-14DAR-1426-SM-5RQIR 42.0
GTEX-ZVZP-1826-SM-5GZXB 40.4
GTEX-ZLV1-1126-SM-4WWBW 40.1
GTEX-111YS-1426-SM-5GID8 39.0
GTEX-ZA64-1226-SM-5HL7B 37.3
GTEX-11EQ9-1326-SM-5985X 36.8
GTEX-11DXX-1626-SM-5H11H 36.6
GTEX-11I78-1126-SM-5A5K5 36.3
GTEX-ZXES-1526-SM-5NQ95 34.5
GTEX-145LT-1026-SM-5LU9O 34.0
GTEX-13FTW-2026-SM-5IJE2 34.0
GTEX-XGQ4-1326-SM-4GIDU 32.7
GTEX-ZZ64-0526-SM-5GZXM 32.5
GTEX-XBED-1426-SM-4AT4G 32.1
GTEX-13PL7-2626-SM-5IFH4 31.7
GTEX-Y9LG-1626-SM-5IFHM 31.4
GTEX-ZPCL-1726-SM-57WEO 31.4
GTEX-ZTSS-0926-SM-59865 31.3
GTEX-13CF3-1226-SM-5LZXN 31.0
GTEX-131XF-1326-SM-5GCMQ 30.0
GTEX-13113-1226-SM-5EGHT 29.7
GTEX-133LE-1426-SM-5IFH1 29.5
GTEX-13D11-0726-SM-5LZZB 28.8
GTEX-WQUQ-2426-SM-4MVNW 28.2
GTEX-11DXZ-1326-SM-5H11X 27.5
GTEX-11P7K-1626-SM-5GU63 26.8
GTEX-WFG8-1626-SM-4LVMB 26.8
GTEX-139T6-1026-SM-5IJGC 26.6
GTEX-13FH7-1226-SM-5IJFK 26.3
GTEX-ZPIC-2326-SM-57WDW 25.8
GTEX-ZTPG-2626-SM-57WFX 25.4
GTEX-X5EB-1626-SM-4E3IV 25.3
GTEX-14E6E-1626-SM-5RQI7 24.8
GTEX-ZTX8-0526-SM-59HLD 24.1
GTEX-13RTK-0826-SM-5Q5C6 24.1
GTEX-12BJ1-1926-SM-5HL9Z 23.9
GTEX-ZYWO-1526-SM-5SIAL 23.8
GTEX-1399S-2026-SM-5KM4B 23.6
GTEX-11P82-0826-SM-5P9GU 23.3
GTEX-YEC4-1726-SM-4W21E 22.9
GTEX-XAJ8-0526-SM-47JYK 21.6
GTEX-XXEK-1026-SM-4BRUW 21.1
GTEX-VJYA-0926-SM-4KL1N 20.3
GTEX-Y114-1426-SM-4TT6W 20.2
GTEX-ZVT2-2126-SM-5NQ93 20.2
GTEX-139YR-2226-SM-5IFFW 20.0
GTEX-WFJO-0926-SM-4LVM2 19.9
GTEX-Y3IK-1726-SM-4YCCR 19.1
GTEX-1399R-2026-SM-5K7WN 19.0
GTEX-Y5LM-1626-SM-4VDTB 18.4
GTEX-ZVP2-1726-SM-5GU5P 18.3
GTEX-ZP4G-1626-SM-57WGD 17.5
GTEX-WFG7-1726-SM-4LVME 17.4
GTEX-ZEX8-1826-SM-57WBH 17.1
GTEX-11NSD-1726-SM-5N9C3 16.8
GTEX-11XUK-1426-SM-5EQMG 16.4
GTEX-13O61-1326-SM-5KM31 15.9
GTEX-Z9EW-0926-SM-5CVMM 15.8
GTEX-WH7G-1626-SM-4LVMY 15.7
GTEX-13O21-1026-SM-5IJDU 14.6
GTEX-11VI4-1626-SM-5EQKO 14.4
GTEX-WRHK-1026-SM-4MVOD 14.4
GTEX-ZLFU-1526-SM-4WWBT 14.2
GTEX-131XG-1726-SM-5LZUR 14.2
GTEX-X15G-1426-SM-4PQZK 13.7
GTEX-13QBU-1926-SM-5IJEW 13.2
GTEX-ZQUD-0926-SM-57WE3 12.0
GTEX-1399U-2126-SM-5IFEZ 11.8
GTEX-117YX-0326-SM-5GICL 11.5
GTEX-13111-1426-SM-5DUW3 11.0
GTEX-UPK5-2026-SM-4JBIM 10.0
GTEX-111CU-1326-SM-5NQ8L 9.8
GTEX-WEY5-1526-SM-4LMJF 9.8
GTEX-ZQG8-2526-SM-57WEQ 9.7
GTEX-145ME-0926-SM-5O9AR 9.5
GTEX-12WSK-1526-SM-5CVNO 8.7
GTEX-VUSG-1726-SM-4KKZL 8.6
GTEX-13OVI-1926-SM-5IJCG 8.5
GTEX-ZF2S-1726-SM-57WFT 6.5
GTEX-1192X-2526-SM-59868 6.2
GTEX-XMK1-1826-SM-4B66F 5.9
GTEX-ZC5H-2326-SM-4WAYT 5.3
GTEX-148VJ-2226-SM-5NQ9M 5.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

94.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 94.3
FF:10024-101D6 15,40,85 years, mixed 94.3

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