Fields »
ABOUT
HELP
BLOG
IRS2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.0TPM
GTEx:8.7RPKM
FANTOM5:92.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB016944

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

6.0
overview Male, age 54
Sample 1
TPM: 12.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 3.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 12.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 4.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 7.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 4.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 2.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 5.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 5.0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 7.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.7

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 10.4
Samples: 149

Max RPKM: 28.1
Min RPKM: 3.6
Std RPKM: 3.5
Median RPKM: 10
GTEX-11ZU8-1126-SM-5EQ5K 28.1
GTEX-14C5O-2626-SM-5RQI5 21.8
GTEX-Y114-1626-SM-4TT7I 20.5
GTEX-ZAJG-2626-SM-5S2NU 17.7
GTEX-ZLV1-1326-SM-4WWER 17.1
GTEX-139T6-1426-SM-5P9J7 16.9
GTEX-12ZZW-2426-SM-5DUWE 16.7
GTEX-13VXT-2026-SM-5L3EW 16.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 7.4
Samples: 196

Max RPKM: 32.5
Min RPKM: 2.1
Std RPKM: 3.6
Median RPKM: 6.7
GTEX-14C38-2626-SM-5RQI4 32.5
GTEX-11TTK-2426-SM-5PNYO 17.4
GTEX-S341-1426-SM-4AD6U 16.6
GTEX-Y8LW-1226-SM-4WWDP 16.1
GTEX-Y3I4-1426-SM-4TT9C 15.1
GTEX-11P81-1126-SM-5GU5G 15.0
GTEX-14AS3-1126-SM-5Q5CR 14.7
GTEX-111YS-1626-SM-5GZZ9 14.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

92.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 92.8
FF:10014-101C5 62,83,84 years, mixed 92.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.