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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2.6TPM
GTEx:0.7RPKM
FANTOM5:5.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA035293

 

Glandular cells

Low  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

2.6

overview Male, age 65
Sample 1
TPM: 1.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 2.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 3.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 2.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

0.7

GTEx sample id

RPKM

0.50.70.80.21.20.00.20.40.60.81.01.21.4
 
0.50.70.80.21.20.00.20.40.60.81.01.21.4

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 0.7
Samples: 88

Max RPKM: 1.5
Min RPKM: 0.2
Std RPKM: 0.2
Median RPKM: 0.7
GTEX-WFG8-1626-SM-4LVMB 1.5
GTEX-111CU-1326-SM-5NQ8L 1.5
GTEX-UPK5-2026-SM-4JBIM 1.4
GTEX-12WSK-1526-SM-5CVNO 1.3
GTEX-1399U-2126-SM-5IFEZ 1.2
GTEX-13RTK-0826-SM-5Q5C6 1.1
GTEX-131XG-1726-SM-5LZUR 1.1
GTEX-WRHK-1026-SM-4MVOD 1.1
GTEX-ZQUD-0926-SM-57WE3 1.1
GTEX-145ME-0926-SM-5O9AR 1.0
GTEX-Y114-1426-SM-4TT6W 1.0
GTEX-ZVT2-2126-SM-5NQ93 1.0
GTEX-13O21-1026-SM-5IJDU 0.9
GTEX-ZP4G-1626-SM-57WGD 0.9
GTEX-13O61-1326-SM-5KM31 0.9
GTEX-11VI4-1626-SM-5EQKO 0.9
GTEX-11XUK-1426-SM-5EQMG 0.9
GTEX-1192X-2526-SM-59868 0.9
GTEX-WFJO-0926-SM-4LVM2 0.8
GTEX-XXEK-1026-SM-4BRUW 0.8
GTEX-X15G-1426-SM-4PQZK 0.8
GTEX-Z9EW-0926-SM-5CVMM 0.8
GTEX-ZC5H-2326-SM-4WAYT 0.8
GTEX-ZLFU-1526-SM-4WWBT 0.8
GTEX-ZQG8-2526-SM-57WEQ 0.8
GTEX-ZTX8-0526-SM-59HLD 0.8
GTEX-ZVP2-1726-SM-5GU5P 0.8
GTEX-XAJ8-0526-SM-47JYK 0.7
GTEX-XBED-1426-SM-4AT4G 0.7
GTEX-WEY5-1526-SM-4LMJF 0.7
GTEX-Y3IK-1726-SM-4YCCR 0.7
GTEX-WFG7-1726-SM-4LVME 0.7
GTEX-VUSG-1726-SM-4KKZL 0.7
GTEX-ZPIC-2326-SM-57WDW 0.7
GTEX-148VJ-2226-SM-5NQ9M 0.7
GTEX-ZZ64-0526-SM-5GZXM 0.7
GTEX-13QBU-1926-SM-5IJEW 0.7
GTEX-13111-1426-SM-5DUW3 0.7
GTEX-11P82-0826-SM-5P9GU 0.7
GTEX-11P7K-1626-SM-5GU63 0.7
GTEX-139T6-1026-SM-5IJGC 0.7
GTEX-11NSD-1726-SM-5N9C3 0.7
GTEX-13CF3-1226-SM-5LZXN 0.7
GTEX-13FH7-1226-SM-5IJFK 0.7
GTEX-13FTW-2026-SM-5IJE2 0.7
GTEX-117YX-0326-SM-5GICL 0.7
GTEX-ZTPG-2626-SM-57WFX 0.6
GTEX-Y5LM-1626-SM-4VDTB 0.6
GTEX-13113-1226-SM-5EGHT 0.6
GTEX-131XF-1326-SM-5GCMQ 0.6
GTEX-ZLV1-1126-SM-4WWBW 0.6
GTEX-13OVI-1926-SM-5IJCG 0.6
GTEX-139YR-2226-SM-5IFFW 0.6
GTEX-ZVZP-1826-SM-5GZXB 0.5
GTEX-ZXES-1526-SM-5NQ95 0.5
GTEX-ZF2S-1726-SM-57WFT 0.5
GTEX-ZEX8-1826-SM-57WBH 0.5
GTEX-ZYWO-1526-SM-5SIAL 0.5
GTEX-12BJ1-1926-SM-5HL9Z 0.5
GTEX-YEC4-1726-SM-4W21E 0.5
GTEX-11EQ9-1326-SM-5985X 0.5
GTEX-Y9LG-1626-SM-5IFHM 0.5
GTEX-145LT-1026-SM-5LU9O 0.5
GTEX-13PL7-2626-SM-5IFH4 0.5
GTEX-XGQ4-1326-SM-4GIDU 0.5
GTEX-133LE-1426-SM-5IFH1 0.5
GTEX-1399S-2026-SM-5KM4B 0.5
GTEX-WH7G-1626-SM-4LVMY 0.5
GTEX-YB5E-1526-SM-5IFIE 0.4
GTEX-14E6E-1626-SM-5RQI7 0.4
GTEX-11DXX-1626-SM-5H11H 0.4
GTEX-ZTSS-0926-SM-59865 0.4
GTEX-13D11-0726-SM-5LZZB 0.4
GTEX-11DXZ-1326-SM-5H11X 0.4
GTEX-11I78-1126-SM-5A5K5 0.4
GTEX-ZPCL-1726-SM-57WEO 0.4
GTEX-X5EB-1626-SM-4E3IV 0.4
GTEX-ZA64-1226-SM-5HL7B 0.4
GTEX-XMK1-1826-SM-4B66F 0.4
GTEX-XUZC-1426-SM-4BRV3 0.4
GTEX-WQUQ-2426-SM-4MVNW 0.3
GTEX-1399R-2026-SM-5K7WN 0.3
GTEX-VJYA-0926-SM-4KL1N 0.3
GTEX-1122O-1326-SM-5H11F 0.3
GTEX-YF7O-1826-SM-5IFIU 0.3
GTEX-14DAR-1426-SM-5RQIR 0.3
GTEX-ZYFG-2026-SM-5E43Y 0.3
GTEX-111YS-1426-SM-5GID8 0.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

5.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 5.6
FF:10024-101D6 15,40,85 years, mixed 5.6

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The Human Protein Atlas project is funded
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