We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SPATS2L
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:67.4TPM
GTEx:8.6RPKM
FANTOM5:64.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA055427

 

Squamous epithelial cells

Medium  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

67.4

overview Female, age 70
Sample 1
TPM: 67.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 65.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 69.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 8.6
Samples: 286

Max RPKM: 14.7
Min RPKM: 4.1
Std RPKM: 1.7
Median RPKM: 8.5
GTEX-OXRK-1326-SM-3NB1A 14.7
GTEX-144GO-2726-SM-5O9A2 13.9
GTEX-146FR-0426-SM-5SI97 13.3
GTEX-11DYG-1326-SM-5N9DO 13.2
GTEX-Y5V6-1026-SM-4VBS2 13.1
GTEX-ZZPT-1426-SM-5N9C5 12.5
GTEX-13S86-0826-SM-5SI6J 12.4
GTEX-U3ZH-1026-SM-4DXUZ 12.4
GTEX-QV44-1126-SM-4R1KO 12.2
GTEX-ZF3C-1626-SM-4WWB4 12.2
GTEX-R53T-1126-SM-48FD4 11.9
GTEX-ZYWO-1026-SM-5E45U 11.8
GTEX-Y8LW-0726-SM-5IFI1 11.7
GTEX-12WSL-1526-SM-5GCP8 11.6
GTEX-132AR-2226-SM-5J2NT 11.6
GTEX-OIZH-0626-SM-3NB1L 11.6
GTEX-S7SF-0926-SM-4AD4M 11.4
GTEX-XLM4-2326-SM-4TT2D 11.3
GTEX-ZF2S-1226-SM-4WWAX 11.3
GTEX-146FQ-1026-SM-5LU8I 11.2
GTEX-RU72-0726-SM-46MUW 11.2
GTEX-WH7G-0926-SM-4LVMJ 11.2
GTEX-QEL4-1426-SM-447AC 11.1
GTEX-R3RS-1326-SM-48FE7 11.0
GTEX-RUSQ-0826-SM-47JWW 11.0
GTEX-1399U-1026-SM-5J1OC 10.9
GTEX-OIZI-1426-SM-3NB1T 10.9
GTEX-ZT9X-0526-SM-5GCOP 10.9
GTEX-133LE-0626-SM-5IFFJ 10.8
GTEX-XV7Q-1126-SM-4BRVS 10.8
GTEX-YEC3-2526-SM-4YCDN 10.8
GTEX-PSDG-1326-SM-48TD2 10.7
GTEX-S33H-0826-SM-4AD5Y 10.7
GTEX-ZXES-1126-SM-5GZXN 10.7
GTEX-11NSD-1126-SM-5N9BQ 10.6
GTEX-TSE9-1226-SM-4DXTM 10.6
GTEX-XMD2-1326-SM-4YCET 10.6
GTEX-Y111-1626-SM-57WCY 10.6
GTEX-131XF-0826-SM-5GICG 10.5
GTEX-117YX-1626-SM-5GZZG 10.4
GTEX-147F3-0826-SM-5NQA7 10.4
GTEX-NPJ8-1926-SM-3MJGB 10.4
GTEX-12KS4-0926-SM-5BC5S 10.3
GTEX-13FTX-0526-SM-5IFGS 10.3
GTEX-145LT-1126-SM-5LUA1 10.3
GTEX-V955-1126-SM-4JBH3 10.3
GTEX-12WSA-1426-SM-5EGJU 10.2
GTEX-13U4I-1126-SM-5LU3S 10.2
GTEX-P4PP-0626-SM-3NM9X 10.2
GTEX-QLQW-0526-SM-4R1KS 10.2
GTEX-ZAB4-1126-SM-5HL86 10.2
GTEX-146FH-1726-SM-5QGQ2 10.1
GTEX-PLZ4-1626-SM-3P618 10.1
GTEX-WFJO-0826-SM-4LVM5 10.1
GTEX-TMMY-1126-SM-4DXSX 10.0
GTEX-ZPU1-1426-SM-4WWFU 10.0
GTEX-UPK5-1226-SM-4IHL8 9.9
GTEX-ZQUD-0426-SM-57WFR 9.9
GTEX-12WSK-1126-SM-5LZV8 9.8
GTEX-13X6I-1026-SM-5LU4C 9.8
GTEX-14ICL-0526-SM-5RQJ6 9.8
GTEX-11XUK-0826-SM-5GU6P 9.7
GTEX-13D11-1926-SM-5IFGB 9.7
GTEX-145MN-1026-SM-5NQ9G 9.7
GTEX-QCQG-0626-SM-48U21 9.7
GTEX-XGQ4-1526-SM-4AT6H 9.7
GTEX-XQ8I-1526-SM-4BOOH 9.7
GTEX-131XE-1426-SM-5HL7V 9.6
GTEX-13FTW-1626-SM-5KM4N 9.6
GTEX-13X6K-2126-SM-5O9D4 9.6
GTEX-RTLS-1126-SM-46MUQ 9.6
GTEX-SNOS-0626-SM-4DM5F 9.6
GTEX-WRHK-0526-SM-4MVOF 9.6
GTEX-XYKS-1526-SM-4BRUP 9.6
GTEX-Y8E4-1726-SM-5LU9G 9.6
GTEX-11DXY-1426-SM-5N9CN 9.5
GTEX-11DXZ-1226-SM-5H11L 9.5
GTEX-13G51-0926-SM-5IFFU 9.5
GTEX-145LS-1826-SM-5LUAZ 9.5
GTEX-UPIC-1026-SM-4IHLT 9.5
GTEX-Y5V5-1626-SM-4VDSG 9.5
GTEX-ZAB5-0926-SM-5CVMV 9.5
GTEX-111YS-0926-SM-5EGGI 9.4
GTEX-PLZ5-0926-SM-3TW8L 9.4
GTEX-XBED-1026-SM-48TCB 9.4
GTEX-Y3IK-1126-SM-51MSV 9.4
GTEX-ZYT6-1126-SM-5GZYR 9.4
GTEX-ZYVF-2226-SM-5GIDD 9.4
GTEX-11P82-0526-SM-5986P 9.3
GTEX-N7MT-0326-SM-48TDP 9.3
GTEX-O5YV-1026-SM-3LK72 9.3
GTEX-T5JC-1726-SM-4DM6U 9.3
GTEX-U4B1-0826-SM-4DXTW 9.3
GTEX-V1D1-1026-SM-4JBHE 9.3
GTEX-Y5LM-1026-SM-4VDSQ 9.3
GTEX-YECK-1626-SM-5IFHQ 9.3
GTEX-ZYY3-1526-SM-5SIA9 9.3
GTEX-13FHO-1726-SM-5IFGM 9.2
GTEX-13X6H-1326-SM-5LU42 9.2
GTEX-P78B-1026-SM-3NMC4 9.2
GTEX-U3ZM-0526-SM-4DXTB 9.2
GTEX-WFG7-1126-SM-4LMK3 9.2
GTEX-ZVE2-1326-SM-5NQ94 9.2
GTEX-ZZ64-0226-SM-5E44X 9.2
GTEX-132Q8-1826-SM-5EGIY 9.1
GTEX-13O21-0626-SM-5IJDI 9.1
GTEX-144FL-2726-SM-5O98Z 9.1
GTEX-139UW-1126-SM-5IJEJ 9.0
GTEX-PWCY-0726-SM-48TCS 9.0
GTEX-RWS6-0826-SM-47JXF 9.0
GTEX-SE5C-1226-SM-4BRWV 9.0
GTEX-WEY5-0926-SM-4LMI4 9.0
GTEX-X4EO-1226-SM-4QARR 9.0
GTEX-X585-1226-SM-46MW7 9.0
GTEX-YFC4-1226-SM-5LU9R 9.0
GTEX-11P81-0826-SM-5P9GR 8.9
GTEX-144GN-0626-SM-5O9B2 8.9
GTEX-P4QT-0626-SM-3NMCP 8.9
GTEX-Z9EW-0526-SM-5HL8S 8.9
GTEX-11EMC-2226-SM-5A5JW 8.8
GTEX-13FH7-0526-SM-5IJF8 8.8
GTEX-145LV-1326-SM-5S2QI 8.8
GTEX-U3ZN-1726-SM-4DXUQ 8.8
GTEX-VJYA-0726-SM-4KL1T 8.8
GTEX-P4QS-0626-SM-3NMD1 8.7
GTEX-RM2N-0726-SM-48FD5 8.7
GTEX-WFON-0826-SM-4LVMI 8.7
GTEX-XK95-1026-SM-4GIDV 8.7
GTEX-YF7O-0926-SM-5IFIF 8.7
GTEX-ZY6K-0626-SM-59HJL 8.7
GTEX-11DXX-1126-SM-5GZZK 8.6
GTEX-12ZZW-1726-SM-5DUVD 8.6
GTEX-13PVR-1826-SM-5Q5CC 8.6
GTEX-13W3W-1626-SM-5LU35 8.6
GTEX-W5WG-1626-SM-4LMKG 8.6
GTEX-11DZ1-2026-SM-5A5KG 8.5
GTEX-13OVI-2626-SM-5KM4T 8.5
GTEX-13RTK-0526-SM-5S2QF 8.5
GTEX-144GM-1426-SM-5LU31 8.5
GTEX-OIZG-1026-SM-3LK5X 8.5
GTEX-R55G-1026-SM-48FDI 8.5
GTEX-RNOR-1226-SM-48FDQ 8.5
GTEX-S4P3-0426-SM-4AD56 8.5
GTEX-TKQ1-0326-SM-4DXSM 8.5
GTEX-XUZC-0426-SM-4BOPE 8.5
GTEX-YB5E-0926-SM-4WWDQ 8.5
GTEX-ZDYS-0826-SM-4WWCR 8.5
GTEX-ZE9C-1126-SM-4WWBD 8.5
GTEX-ZTX8-0226-SM-5E44D 8.5
GTEX-13QJ3-1726-SM-5RQK9 8.4
GTEX-14DAQ-1426-SM-5RQJD 8.4
GTEX-14E1K-1226-SM-5S2PD 8.4
GTEX-NFK9-1126-SM-3LK78 8.4
GTEX-T8EM-0526-SM-4DM64 8.4
GTEX-VUSG-1226-SM-4KKZF 8.4
GTEX-X15G-0826-SM-4PQZD 8.4
GTEX-XMK1-1326-SM-4B65Q 8.4
GTEX-ZG7Y-1126-SM-4WWEZ 8.4
GTEX-ZLV1-0526-SM-4WWD4 8.4
GTEX-12696-1326-SM-5FQTJ 8.3
GTEX-139T6-0626-SM-5IFF9 8.3
GTEX-OXRL-0626-SM-3NM9C 8.3
GTEX-R45C-1226-SM-48FEE 8.3
GTEX-S32W-0926-SM-4AD5X 8.3
GTEX-X62O-2226-SM-46MW3 8.3
GTEX-11P7K-1326-SM-5BC5G 8.2
GTEX-11VI4-0526-SM-5EQ48 8.2
GTEX-T2IS-0826-SM-4DM6L 8.2
GTEX-13111-0826-SM-5LZV3 8.1
GTEX-1399R-0826-SM-5IJEL 8.1
GTEX-13W46-1926-SM-5J2MF 8.1
GTEX-14BMU-0926-SM-5S2QB 8.1
GTEX-P4PQ-0626-SM-3NMCU 8.1
GTEX-QLQ7-0926-SM-447BC 8.1
GTEX-TML8-1526-SM-4DXUX 8.1
GTEX-ZA64-0626-SM-5HL9O 8.1
GTEX-ZC5H-1326-SM-5HL7E 8.1
GTEX-ZPCL-1426-SM-57WEC 8.1
GTEX-OOBK-0625-SM-3LK5P 8.0
GTEX-SNMC-0526-SM-4DM69 8.0
GTEX-WFG8-1226-SM-4V6EI 8.0
GTEX-WK11-1026-SM-4OOS8 8.0
GTEX-WQUQ-1626-SM-4OOSH 8.0
GTEX-XBEW-1326-SM-4AT63 8.0
GTEX-ZTPG-1626-SM-5DUX2 8.0
GTEX-ZUA1-1226-SM-5NQ6O 8.0
GTEX-1399Q-1126-SM-5P9JA 7.9
GTEX-13OVG-0626-SM-5IFEP 7.9
GTEX-14AS3-0626-SM-5QGQD 7.9
GTEX-PLZ6-0526-SM-3P61C 7.9
GTEX-QVUS-0626-SM-447CC 7.9
GTEX-R55C-0826-SM-48FCL 7.9
GTEX-X3Y1-1326-SM-4PQZB 7.9
GTEX-XUJ4-1026-SM-4BOPB 7.9
GTEX-111CU-0726-SM-5GZYD 7.8
GTEX-11LCK-1726-SM-5S2OQ 7.8
GTEX-13QBU-1026-SM-5LU3R 7.8
GTEX-14E6E-0726-SM-5S2R3 7.8
GTEX-T6MO-0526-SM-4DM6R 7.8
GTEX-11I78-1526-SM-5A5K7 7.7
GTEX-1212Z-2126-SM-5FQTM 7.7
GTEX-145ME-0526-SM-5QGQV 7.7
GTEX-T5JW-1326-SM-4DM5G 7.7
GTEX-Y9LG-0626-SM-4WWDH 7.7
GTEX-ZYW4-1326-SM-5E45N 7.7
GTEX-13CF3-1626-SM-5IFG9 7.6
GTEX-13OVJ-1226-SM-5L3HA 7.6
GTEX-1497J-2726-SM-5SI9W 7.6
GTEX-S3XE-0926-SM-4AD4S 7.6
GTEX-S4Q7-0626-SM-4AD5M 7.6
GTEX-WOFM-0626-SM-4OOS3 7.6
GTEX-ZT9W-1326-SM-51MTB 7.6
GTEX-131XG-1026-SM-5GCMX 7.5
GTEX-139TU-1226-SM-5J2NL 7.5
GTEX-XXEK-0326-SM-4BRVV 7.5
GTEX-12BJ1-1626-SM-5HL8Y 7.4
GTEX-139YR-1726-SM-5IFFK 7.4
GTEX-R55E-1326-SM-48FCR 7.4
GTEX-ZTSS-0626-SM-59867 7.4
GTEX-ZVT2-1326-SM-5E45H 7.4
GTEX-11TT1-0526-SM-5P9JO 7.3
GTEX-Q2AI-0626-SM-48TZU 7.3
GTEX-QDVN-1026-SM-48TZA 7.3
GTEX-11EQ9-0726-SM-5A5K2 7.2
GTEX-12WSD-1826-SM-5GCOA 7.2
GTEX-13O1R-1326-SM-5IJF5 7.2
GTEX-13O3Q-0826-SM-5IFGF 7.2
GTEX-13OW8-2326-SM-5L3I9 7.2
GTEX-145MO-1426-SM-5Q5BS 7.2
GTEX-PWN1-0626-SM-48TDT 7.2
GTEX-R55D-1126-SM-48FEB 7.2
GTEX-SUCS-0726-SM-4DM7J 7.2
GTEX-X4LF-0626-SM-4QASB 7.2
GTEX-Y3I4-1226-SM-4TT8N 7.2
GTEX-13NZB-1226-SM-5J2MW 7.1
GTEX-QEG5-1426-SM-447AS 7.1
GTEX-Y114-0926-SM-4TT7J 7.1
GTEX-ZYFG-1126-SM-5GICY 7.1
GTEX-12C56-1226-SM-5FQSU 7.0
GTEX-Q2AH-0826-SM-48TZN 7.0
GTEX-QESD-0826-SM-47J4G 7.0
GTEX-UJHI-0826-SM-4IHLM 7.0
GTEX-14BIN-2726-SM-5RQIE 6.9
GTEX-QEG4-0726-SM-4R1JL 6.9
GTEX-S341-0526-SM-4AD5U 6.9
GTEX-1122O-1726-SM-5GICM 6.8
GTEX-11EM3-0826-SM-5N9CC 6.8
GTEX-11ZU8-1526-SM-5EGHX 6.8
GTEX-YJ89-1526-SM-5P9IR 6.8
GTEX-ZF29-1326-SM-4WWB6 6.8
GTEX-ZGAY-1126-SM-4WWBS 6.8
GTEX-132QS-1426-SM-5P9GE 6.7
GTEX-1399S-1326-SM-5P9GH 6.7
GTEX-UJMC-0926-SM-4IHLK 6.7
GTEX-13PVQ-1726-SM-5IFF3 6.6
GTEX-14A6H-1326-SM-5NQBC 6.6
GTEX-OXRN-1726-SM-3NM9B 6.6
GTEX-RU1J-0326-SM-46MUM 6.5
GTEX-11NUK-1326-SM-5P9GN 6.2
GTEX-11ZTS-2626-SM-5EGIC 6.2
GTEX-13FLV-1126-SM-5J2NO 6.2
GTEX-145MF-1426-SM-5O9B6 6.2
GTEX-14H4A-1626-SM-5SI69 6.2
GTEX-1211K-0926-SM-5FQTL 6.1
GTEX-131YS-1426-SM-5IJF7 6.1
GTEX-WVLH-1426-SM-4MVNX 6.1
GTEX-ZVP2-1326-SM-57WCE 6.1
GTEX-RN64-1026-SM-48FDX 6.0
GTEX-QDVJ-0726-SM-48U1W 5.9
GTEX-U8XE-1726-SM-4E3IF 5.9
GTEX-11GSP-1826-SM-5N9DQ 5.8
GTEX-RVPV-0526-SM-47JYL 5.8
GTEX-PVOW-1626-SM-48TC9 5.7
GTEX-12ZZX-1326-SM-5DUWI 5.6
GTEX-12ZZY-1426-SM-5N9EI 5.5
GTEX-11ONC-1526-SM-5GU6S 5.4
GTEX-REY6-1326-SM-48FDO 5.4
GTEX-XOTO-2126-SM-4B64U 5.4
GTEX-14C38-2126-SM-5RQJO 5.3
GTEX-OXRP-0926-SM-48TC1 5.3
GTEX-11TUW-1326-SM-5EQKV 5.2
GTEX-XQ3S-1126-SM-4BOPK 5.2
GTEX-S95S-0426-SM-4B64I 5.1
GTEX-148VJ-1026-SM-5LU98 4.7
GTEX-X4XY-1726-SM-46MVO 4.7
GTEX-117YW-1926-SM-5H121 4.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

64.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 64.9
FF:10015-101C6 68,74,75 years, mixed 64.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.