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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.0TPM
GTEx:106.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA043640

 

Antibody HPA046280

 

Antibody CAB005417

 

Antibody CAB012406

 

Endothelial cells

Low   Not detected   Low   Low  

Glial cells

Not detected   Low   Not detected   Low  

Neuronal cells

Not detected   Medium   Medium   Medium  

Neuropil

Medium   Medium   Low   High  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

23.0

N/A Male, age 5
Sample 1
TPM: 20.4
overview Female, age 40
Sample 2
TPM: 1.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 47.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

106.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 104.1
Samples: 114

Max RPKM: 165.8
Min RPKM: 49.6
Std RPKM: 27.8
Median RPKM: 102
GTEX-13VXU-2926-SM-5LU5C 165.8
GTEX-WHSE-3026-SM-3P5ZH 161.6
GTEX-X585-3026-SM-46MWF 161.0
GTEX-145LS-3126-SM-5Q5BY 159.6
GTEX-13NYS-3126-SM-5KLYV 159.4
GTEX-13SLX-3126-SM-5S2Q5 157.1
GTEX-14BMV-3026-SM-5S2PQ 155.9
GTEX-13OW8-2826-SM-5L3GC 147.4
GTEX-13NYC-2826-SM-5K7WR 146.3
GTEX-WWYW-3126-SM-3NB39 142.5
GTEX-ZYFD-3026-SM-5E44C 139.3
GTEX-XLM4-3026-SM-4AT6L 138.1
GTEX-XOTO-3026-SM-4B65M 136.7
GTEX-14ASI-3026-SM-5S2PN 135.5
GTEX-11DXY-3226-SM-5GIDE 135.3
GTEX-11ONC-2926-SM-5P9JM 134.9
GTEX-1313W-3126-SM-5LZUI 133.8
GTEX-WZTO-2926-SM-3NM9I 133.5
GTEX-145MH-3026-SM-5Q5DZ 133.1
GTEX-ZVT3-3026-SM-5E43N 132.1
GTEX-WL46-2926-SM-3LK82 131.6
GTEX-WVLH-3026-SM-3MJG9 131.6
GTEX-145MG-3026-SM-5RQJA 131.1
GTEX-YFC4-3126-SM-5PNV6 131.1
GTEX-YJ89-3026-SM-5IFJI 130.7
GTEX-13FLW-1426-SM-5K7YE 130.5
GTEX-139T8-1026-SM-5J2MC 130.0
GTEX-117XS-3026-SM-5N9CA 129.4
GTEX-13O3O-3126-SM-5KM3H 126.3
GTEX-T6MN-2626-SM-32PMQ 124.5
GTEX-ZUA1-3026-SM-59HJC 124.0
GTEX-T5JC-2426-SM-3NMDB 123.6
GTEX-11PRG-2926-SM-5987A 123.1
GTEX-R55F-1326-SM-5S2V4 123.0
GTEX-12WSC-3026-SM-5GCNF 121.8
GTEX-12126-1026-SM-5P9JJ 121.7
GTEX-13FXS-3126-SM-5J2NN 121.3
GTEX-144GL-3026-SM-5Q5CW 120.6
GTEX-UTHO-3026-SM-3GAFB 117.5
GTEX-144FL-3026-SM-5O99C 117.2
GTEX-T2IS-3026-SM-32QPM 114.8
GTEX-13FHO-3026-SM-5J1O9 114.7
GTEX-ZAK1-3026-SM-5S2MJ 112.8
GTEX-132Q8-3026-SM-5PNVG 112.4
GTEX-11DXW-1126-SM-5H12Q 111.9
GTEX-12ZZX-2926-SM-5GCOQ 111.3
GTEX-11OC5-0726-SM-5P9JK 109.9
GTEX-RNOR-2326-SM-2TF4I 108.9
GTEX-12ZZY-3026-SM-5GCOU 108.0
GTEX-13OW6-3026-SM-5J2MI 108.0
GTEX-11ZUS-2926-SM-5FQSL 107.7
GTEX-11NUK-2926-SM-5A5MD 106.4
GTEX-Z93S-2926-SM-57WB9 104.1
GTEX-11GSO-2926-SM-5HL73 103.3
GTEX-13FHP-3026-SM-5IJBS 103.2
GTEX-131YS-3126-SM-5KLYT 102.8
GTEX-11WQK-3026-SM-5EQL6 102.2
GTEX-11GS4-3126-SM-5A5LH 101.8
GTEX-PVOW-2526-SM-2XCF7 100.0
GTEX-145MF-2726-SM-5O995 98.7
GTEX-13OVH-3026-SM-5MR4N 98.3
GTEX-13O3Q-2926-SM-5KM45 97.3
GTEX-1192X-3126-SM-5N9BY 96.8
GTEX-TSE9-3026-SM-3DB76 93.7
GTEX-QVUS-2826-SM-3GADB 92.8
GTEX-ZE7O-3126-SM-5HL5X 92.5
GTEX-Y8DK-0826-SM-4TT3T 91.9
GTEX-11EI6-3026-SM-5GZZO 91.0
GTEX-QMR6-1426-SM-32PLA 90.9
GTEX-111FC-3126-SM-5GZZ2 90.7
GTEX-QVJO-1426-SM-2S1QY 90.6
GTEX-12ZZZ-3026-SM-5BC67 90.5
GTEX-1399T-3026-SM-5KLZC 90.3
GTEX-NPJ8-1526-SM-2D7VU 90.1
GTEX-Q2AG-2926-SM-2HMJ3 89.6
GTEX-X4XX-3026-SM-3NMB2 89.1
GTEX-13S7M-3126-SM-5RQJQ 88.6
GTEX-13X6K-2926-SM-5Q5D5 88.3
GTEX-13X6J-3026-SM-5Q5CU 87.9
GTEX-Y111-2726-SM-4TT3N 87.5
GTEX-NPJ7-2726-SM-2I3FT 87.3
GTEX-13PL6-3126-SM-5LUAR 86.8
GTEX-12WSH-3026-SM-5CVNI 86.7
GTEX-131XW-3126-SM-5LZUC 85.6
GTEX-13PVQ-3026-SM-5SI93 84.8
GTEX-12ZZW-2926-SM-5LZUP 84.3
GTEX-13NYB-3026-SM-5IJD7 84.2
GTEX-RU72-3026-SM-5SI7Y 84.0
GTEX-11OF3-2926-SM-5HL78 82.4
GTEX-QDT8-2926-SM-32PKC 81.0
GTEX-13QIC-2926-SM-5J2NF 80.4
GTEX-OXRN-2426-SM-2I5EQ 80.1
GTEX-11EMC-3226-SM-5EGKW 79.6
GTEX-ZAJG-3126-SM-5HL9J 78.8
GTEX-13OVJ-2826-SM-5L3GW 78.5
GTEX-1128S-2726-SM-5H12C 76.1
GTEX-1117F-3226-SM-5N9CT 75.6
GTEX-12WSD-3126-SM-5HL7P 73.8
GTEX-13JVG-3126-SM-5L3FH 72.8
GTEX-11GSP-3226-SM-5986O 72.0
GTEX-11TTK-2926-SM-5PNYP 71.8
GTEX-ZZPT-3026-SM-5GZXH 70.8
GTEX-13JUV-2926-SM-5LZX7 70.6
GTEX-11NV4-2126-SM-5N9DS 67.4
GTEX-14A5I-2926-SM-5Q5CQ 67.2
GTEX-13OW7-3026-SM-5L3GY 66.1
GTEX-1445S-3026-SM-5O9BR 66.1
GTEX-11O72-2926-SM-5BC4V 63.7
GTEX-13G51-3026-SM-5IJB8 55.8
GTEX-12WSA-2926-SM-5EQ4D 53.9
GTEX-147GR-3026-SM-5S2ML 53.3
GTEX-N7MT-1126-SM-5SI7V 52.1
GTEX-PWO3-0926-SM-2I5EY 50.7
GTEX-13IVO-2926-SM-5L3CZ 49.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 109.1
Samples: 108

Max RPKM: 198.2
Min RPKM: 39.7
Std RPKM: 36.6
Median RPKM: 106.9
GTEX-13NYS-0011-R10a-SM-5MR4S 198.2
GTEX-X585-0011-R10A-SM-46MUY 186.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 182.6
GTEX-13O3O-0011-R10a-SM-5LUA9 177.7
GTEX-145MG-0011-R10a-SM-5PNWG 175.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 167.0
GTEX-NL3H-0011-R10A-SM-2I3E9 166.7
GTEX-12WSE-0011-R10b-SM-5P9JV 164.2
GTEX-131XH-0011-R10a-SM-5EGLJ 163.9
GTEX-13S7M-0011-R10b-SM-5PNZB 161.5
GTEX-13SLX-0011-R10a-SM-5P9HV 161.1
GTEX-13N1W-0011-R10b-SM-5MR4H 154.8
GTEX-WVLH-0011-R10A-SM-3MJFM 152.6
GTEX-YFC4-0011-R10a-SM-4SOK5 152.3
GTEX-13X6I-0011-R10a-SM-5PNWI 150.7
GTEX-WWYW-0011-R10A-SM-3NB35 149.5
GTEX-X4EP-0011-R10B-SM-4QASJ 147.6
GTEX-145MH-0011-R10b-SM-5PNUK 147.5
GTEX-XLM4-0011-R10A-SM-4AT5P 145.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 144.8
GTEX-WZTO-0011-R10B-SM-4E3KB 144.7
GTEX-13X6K-0011-R10a-SM-5P9JR 144.5
GTEX-145LS-0011-R10a-SM-5PNUQ 144.4
GTEX-14BIN-0011-R10a-SM-5S2UA 143.1
GTEX-T6MN-0011-R10A-SM-32QP7 143.0
GTEX-12WSF-0011-R10a-SM-5LZVH 140.5
GTEX-13OW7-0011-R10a-SM-5L3H3 140.1
GTEX-12WSC-0011-R10a-SM-5GU57 137.3
GTEX-1313W-0011-R10b-SM-5DUXA 137.0
GTEX-13QIC-0011-R10a-SM-5O9C7 131.5
GTEX-Z93S-0011-R10a-SM-4RGNM 130.1
GTEX-147F4-0011-R10b-SM-5S2WC 127.7
GTEX-YJ89-0011-R10a-SM-4SOK9 127.3
GTEX-13OVL-0011-R10a-SM-5L3GS 125.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 125.9
GTEX-13FHO-0011-R10b-SM-5J2MM 125.3
GTEX-147GR-0011-R10b-SM-5S2UM 125.3
GTEX-N7MS-0011-R10A-SM-2HMJK 124.4
GTEX-T5JC-0011-R10A-SM-32PM2 122.9
GTEX-ZF28-0011-R10a-SM-4WWEH 122.6
GTEX-X4XX-0011-R10B-SM-46MWO 121.7
GTEX-13FXS-0011-R10a-SM-5J2MA 121.0
GTEX-S7SE-0011-R10A-SM-2XCDF 120.8
GTEX-13N2G-0011-R10a-SM-5MR34 119.3
GTEX-13X6J-0011-R10b-SM-5PNWA 118.9
GTEX-13O3Q-0011-R10b-SM-5KM39 117.7
GTEX-N7MT-0011-R10A-SM-2I3E1 117.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 113.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 112.9
GTEX-131YS-0011-R10b-SM-5EQ5N 110.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 110.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 108.8
GTEX-13OW8-0011-R10a-SM-5L3H6 107.5
GTEX-WL46-0011-R10A-SM-3MJFQ 107.3
GTEX-13FLW-0011-R10b-SM-5LZZF 106.6
GTEX-12WSH-0011-R10a-SM-5LZUS 106.0
GTEX-ZVT3-0011-R10b-SM-57WB6 105.9
GTEX-14BIL-0011-R10a-SM-5SI75 105.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 105.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 104.3
GTEX-13CZV-0011-R10b-SM-5LZYD 102.3
GTEX-12WSM-0011-R10a-SM-5DUWV 99.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 99.4
GTEX-13OW6-0011-R10a-SM-5L3HE 99.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 98.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 97.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 96.4
GTEX-145LU-0011-R10a-SM-5PNWJ 96.2
GTEX-13NYB-0011-R10a-SM-5KM43 95.1
GTEX-QMR6-0011-R10A-SM-32PKO 92.5
GTEX-11WQK-0011-R10a-SM-5BC6R 91.9
GTEX-13JUV-0011-R10b-SM-5LZXR 91.4
GTEX-P44H-0011-R10A-SM-2XCEK 91.3
GTEX-11H98-0011-R10b-SM-5NQ98 89.8
GTEX-13QJC-0011-R10a-SM-5SI63 88.3
GTEX-QDT8-0011-R10A-SM-32PKG 88.2
GTEX-QVUS-0011-R10A-SM-3GIK3 87.9
GTEX-RVPU-0011-R10A-SM-2XCAH 86.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 86.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 86.2
GTEX-13G51-0011-R10b-SM-5LZYF 84.7
GTEX-TSE9-0011-R10A-SM-3DB7O 83.5
GTEX-12126-0011-R10b-SM-5BC6T 80.1
GTEX-ZUA1-0011-R10a-SM-51MT6 79.2
GTEX-OXRN-0011-R10A-SM-2I5GC 78.6
GTEX-NL4W-0011-R10A-SM-2I3DY 74.5
GTEX-X261-0011-R10B-SM-4E3JT 73.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 72.6
GTEX-13NZA-0011-R10b-SM-5KM54 72.3
GTEX-XMD1-0011-R10A-SM-4AT4A 71.2
GTEX-11ZUS-0011-R10b-SM-5BC79 68.7
GTEX-12WSA-0011-R10b-SM-5P9ET 68.3
GTEX-13SLW-0011-R10a-SM-5S2UI 67.4
GTEX-1445S-0011-R10a-SM-5PNWB 65.1
GTEX-11WQC-0011-R10a-SM-57WCT 63.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 62.9
GTEX-12WSD-0011-R10b-SM-5GU79 62.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 58.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 56.7
GTEX-ZXG5-0011-R10a-SM-57WDD 54.4
GTEX-139TS-0011-R10a-SM-5K7TU 51.9
GTEX-1477Z-0011-R10b-SM-5S2RF 49.8
GTEX-OXRO-0011-R10A-SM-2I5EH 47.4
GTEX-13JVG-0011-R10b-SM-5KM2P 46.3
GTEX-14753-0011-R10b-SM-5S2WE 45.2
GTEX-ZV68-0011-R10a-SM-51MT7 43.2
GTEX-13IVO-0011-R10a-SM-5LZY3 42.3
GTEX-131XW-0011-R10a-SM-5DUVA 39.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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