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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Provider

Atlas Antibodies
Sigma-Aldrich
  SDIX
 

Product name

HPA025958   3036.00.02  

Host species

Rabbit   Rabbit  

Clonality

pAb   msAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity  

Other gene match

   

Released in version

5   5  

References

1    

VALIDATION SUMMARY

 
 

Antibody HPA025958

 

Antibody CAB020722

 
Immunocytochemistry

  Supported  
Immunohistochemistry

Approved   Approved  
Western blot

Uncertain   Uncertain  
Protein array

Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Standard validation

  Supported  

   

Figure description

  Immunofluorescent staining of human cell line U-2 OS shows localization to nucleoplasm & cytosol.  

Antibody dilution

  1:15  

Literature conformity

  The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Standard validation

Approved   Approved  

   

Figure description

Immunohistochemical staining of human kidney shows strong nuclear positivity in cells in tubules and cells in glomeruli.   Immunohistochemical staining of human testis shows strong nuclear positivity in cells in seminiferous ducts.  

Expression

RNA: detected in 37 tissues
Protein: detected in 63 cell types
  RNA: detected in 37 tissues
Protein: detected in 68 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:15   1:60  

Literature conformity

Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.   Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

   

Figure description

   

Target mass (kDa)

83.4, 72.4, 71.8, 71.3, 71.2, 69.1, 68.6, 68.5, 67, 65.3, 64.8, 64.6, 64.1, 62.1, 57.4, 54.6, 54.2, 54.1, 48.1   83.4, 72.4, 71.8, 71.3, 71.2, 69.1, 68.6, 68.5, 67, 65.3, 64.8, 64.6, 64.1, 62.1, 57.4, 54.6, 54.2, 54.1, 48.1, 32.8, 30.8, 29.7, 25, 24.7, 23.8, 23.6, 22.3, 21.9, 21.5, 19.2, 19.1, 18.9, 18, 17.7, 17.6, 17, 16.8, 16.7, 15.7, 14.8, 14.7, 14.5, 13.9, 12.8, 9, 7.1, 6.1  

Antibody dilution

1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA025958

 

Antibody CAB020722

 

Antigen

Recombinant protein fragment   Genetic immunization  

Length (aa)

107    

Antigen sequence

HGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHREDGVALRGSHSLL
PNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDE
GDENLQD
   

Matching transcripts

TCF4-001 - ENSP00000346440 [100%]
TCF4-002 - ENSP00000348374 [100%]
TCF4-003 - ENSP00000440731 [100%]
TCF4-004 - ENSP00000381382 [100%]
TCF4-005 - ENSP00000455346 [100%]
TCF4-006 - ENSP00000457649 [100%]
TCF4-007 - ENSP00000445202 [100%]
TCF4-008 - ENSP00000455135 [100%]
TCF4-009 - ENSP00000439656 [100%]
TCF4-010 - ENSP00000455179 [100%]
TCF4-011 - ENSP00000441562 [100%]
TCF4-012 - ENSP00000454647 [100%]
TCF4-013 - ENSP00000439827 [100%]
TCF4-015 - ENSP00000409447 [100%]
TCF4-016 - ENSP00000457765 [100%]
TCF4-019 - ENSP00000457263 [100%]
TCF4-041 - ENSP00000455418 [100%]
TCF4-042 - ENSP00000455261 [100%]
TCF4-044 - ENSP00000455763 [100%]
TCF4-045 - ENSP00000456125 [100%]
TCF4-046 - ENSP00000454366 [100%]
TCF4-049 - ENSP00000486670 [100%]
TCF4-060 - ENSP00000486072 [100%]
TCF4-074 - ENSP00000455984 [100%]
TCF4-201 - ENSP00000478549 [100%]
   

Other gene match

   
ANTIGEN VIEW
«
TCF4-001
TCF4-002
TCF4-003
TCF4-004
TCF4-005
TCF4-006
TCF4-007
TCF4-008
TCF4-009
TCF4-010
TCF4-011
TCF4-012
TCF4-013
TCF4-015
TCF4-016
TCF4-019
TCF4-041
TCF4-042
TCF4-044
TCF4-045
TCF4-046
TCF4-049
TCF4-060
TCF4-074
TCF4-201
»

RELEVANT PUBLICATIONS

 
 

Antibody HPA025958

 

Antibody CAB020722

 

1.

Sox4 functions as a positive regulator of β-catenin signaling through upregulation of TCF4 during morular differentiation of endometrial carcinomas
Saegusa M et al
Lab Invest 2012;92(4):511-21
   
 

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