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ZSCAN5B

GENERAL INFORMATION

Gene name

 ZSCAN5B

Gene description

 Zinc finger and SCAN domain containing 5B

Protein class

 Predicted intracellular proteins
Transcription factors

Predicted localization

 Intracellular

Number of transcripts

 4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enriched (testis)
GTEx:Tissue enriched (testis)

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression in selected cells including Leydig cells and glandular cells in the intestine.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly not consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.

Reliability score

 Uncertain based on 3 antibodies.
HPA043123 , HPA046836 , HPA059494
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (testis)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (testis)

GENE INFORMATION

Gene name

 ZSCAN5B (HGNC Symbol)

Synonyms

 ZNF371, ZNF495B

Description

 Zinc finger and SCAN domain containing 5B (HGNC Symbol)

Entrez gene summary

Chromosome

 19

Cytoband

 q13.43

Chromosome location (bp)

 56189570 - 56197920

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000197213 (version 83.38)

Entrez gene

 342933

UniProt

 A6NJL1 (UniProt - Inferred from homology)

neXtProt

 NX_A6NJL1

Antibodypedia

 ZSCAN5B antibodies

PROTEIN BROWSER
ZSCAN5B-001
ZSCAN5B-002
ZSCAN5B-003
ZSCAN5B-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
ZSCAN5B-001
ENSP00000466072
ENST00000586855
A6NJL1 [Direct mapping]
Zinc finger and SCAN domain-containing protein 5B
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Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
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GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0046872 [metal ion binding]
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 495 aa
55.8 kDa 		No 0
ZSCAN5B-002
ENSP00000465118
ENST00000589938
K7EJD1 [Direct mapping]
Zinc finger and SCAN domain-containing protein 5B
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Predicted intracellular proteins
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
Show all
 169 aa
19.3 kDa 		No 0
ZSCAN5B-003
ENSP00000468660
ENST00000587032
K7ESD3 [Direct mapping]
Zinc finger and SCAN domain-containing protein 5B
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Predicted intracellular proteins
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
Show all
 137 aa
15.8 kDa 		No 0
ZSCAN5B-201
ENSP00000351883
ENST00000358992
A6NJL1 [Direct mapping]
Zinc finger and SCAN domain-containing protein 5B
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0046872 [metal ion binding]
Show all
 495 aa
55.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.