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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:368.4RPKM
FANTOM5:1450.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA004426

 

Antibody CAB004647

 

Glial cells

High   High  

Neuronal cells

High   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

368.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 368.4
Samples: 117

Max RPKM: 576.7
Min RPKM: 156.2
Std RPKM: 102.8
Median RPKM: 362.3
GTEX-132Q8-0011-R5a-SM-5IJDM 576.7
GTEX-11H98-0011-R5b-SM-57WCF 556.8
GTEX-13G51-0011-R5a-SM-5L3EB 556.0
GTEX-13JVG-0011-R5a-SM-5MR4O 554.6
GTEX-XMD1-0011-R5A-SM-4AT47 552.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 546.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 537.2
GTEX-T6MN-0011-R5A-SM-32QPD 529.9
GTEX-131YS-0011-R5b-SM-5K7YB 528.0
GTEX-13X6K-0011-R5b-SM-5PNUE 517.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 516.5
GTEX-12WSA-0011-R5b-SM-5GU5I 516.2
GTEX-N7MT-0011-R5a-SM-2I3G6 513.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 513.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 509.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 509.2
GTEX-QVJO-0011-R5A-SM-2S1QM 501.8
GTEX-11GSP-0011-R5a-SM-57WBE 494.8
GTEX-13NYS-0011-R5a-SM-5MR4D 492.2
GTEX-13OW6-0011-R5a-SM-5O9BK 475.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 471.8
GTEX-12WSB-0011-R5b-SM-5GU67 471.7
GTEX-13JUV-0011-R5a-SM-5LZY5 469.2
GTEX-13FLV-0011-R5a-SM-5LZWT 461.2
GTEX-13X6I-0011-R5a-SM-5PNWW 459.0
GTEX-ZUA1-0011-R5b-SM-51MTG 458.9
GTEX-S7SE-0011-R5A-SM-2XCDA 450.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 449.6
GTEX-RVPV-0011-R5A-SM-2TF69 445.9
GTEX-1399T-0011-R5b-SM-5IJDK 441.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 440.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 433.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 431.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 430.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 424.6
GTEX-145LS-0011-R5a-SM-5SI65 423.4
GTEX-12WSC-0011-R5b-SM-5CVNS 411.8
GTEX-WWYW-0011-R5A-SM-3NB3E 411.4
GTEX-14BIM-0011-R5b-SM-5S2RM 409.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 407.6
GTEX-1313W-0011-R5b-SM-5L3EP 403.9
GTEX-X585-0011-R5A-SM-46MVI 403.7
GTEX-R55E-0011-R5A-SM-2TC5N 398.9
GTEX-T5JC-0011-R5A-SM-32PLK 398.9
GTEX-N7MS-0011-R5a-SM-2HMK8 396.5
GTEX-11OF3-0011-R5a-SM-57WB4 395.6
GTEX-RU72-0011-R5A-SM-2TF6U 394.9
GTEX-NL3H-0011-R5a-SM-2I3GB 392.8
GTEX-P44H-0011-R5A-SM-2XCEX 390.1
GTEX-13VXU-0011-R5a-SM-5O9D7 387.5
GTEX-144GO-0011-R5a-SM-5PNUR 384.7
GTEX-13SLX-0011-R5a-SM-5O9BV 384.1
GTEX-WZTO-0011-R5B-SM-3NMC5 383.3
GTEX-OHPN-0011-R5A-SM-2I5FF 379.9
GTEX-WVLH-0011-R5A-SM-3MJFW 377.8
GTEX-145MH-0011-R5a-SM-5P9JT 370.7
GTEX-WL46-0011-R5A-SM-3LK6V 369.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 365.7
GTEX-13CZV-0011-R5a-SM-5K7XA 362.3
GTEX-13NYB-0011-R5a-SM-5MR45 362.1
GTEX-UTHO-0011-R5A-SM-3GIJD 357.5
GTEX-NL4W-0011-R5a-SM-2I3GD 354.2
GTEX-13X6J-0011-R5b-SM-5PNWT 352.0
GTEX-13OW7-0011-R5b-SM-5O9DM 351.3
GTEX-13OVL-0011-R5b-SM-5L3FU 350.4
GTEX-1445S-0011-R5a-SM-5PNUS 349.2
GTEX-14ABY-0011-R5b-SM-5SI7B 347.7
GTEX-13OW5-0011-R5b-SM-5L3FR 345.8
GTEX-TSE9-0011-R5A-SM-3DB7J 345.4
GTEX-X261-0011-R5A-SM-3NMB4 344.1
GTEX-X4XX-0011-R5A-SM-46MWN 340.0
GTEX-T2IS-0011-R5A-SM-32QP4 333.9
GTEX-13OVH-0011-R5b-SM-5KM4L 329.8
GTEX-13FXS-0011-R5b-SM-5LZYE 329.1
GTEX-13O3O-0011-R5b-SM-5KM44 323.1
GTEX-13S7M-0011-R5b-SM-5P9HS 322.4
GTEX-XOTO-0011-R5A-SM-4B657 320.3
GTEX-ZE7O-0011-R5a-SM-57WBO 319.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 319.0
GTEX-12ZZX-0011-R5a-SM-5HL89 317.9
GTEX-11NV4-0011-R5a-SM-5NQ88 317.7
GTEX-139TS-0011-R5b-SM-5J2MZ 317.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 311.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 311.9
GTEX-13CIG-0011-R5b-SM-5L3F2 308.7
GTEX-139TT-0011-R5b-SM-5K7W8 307.2
GTEX-13FLW-0011-R5a-SM-5LZX6 305.6
GTEX-YFC4-0011-R5a-SM-4RGLR 305.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 301.8
GTEX-12WSF-0011-R5a-SM-5HL8K 296.7
GTEX-QMR6-0011-R5A-SM-32PKT 293.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 290.1
GTEX-PVOW-0011-R5A-SM-32PL7 287.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 284.1
GTEX-ZXG5-0011-R5b-SM-57WBN 284.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 281.9
GTEX-ZVT3-0011-R5a-SM-51MSI 276.7
GTEX-12WSD-0011-R5b-SM-5CVNG 275.7
GTEX-OXRN-0011-R5A-SM-2I5EF 259.9
GTEX-ZV68-0011-R5a-SM-4YCDW 250.7
GTEX-14BIN-0011-R5b-SM-5SI78 245.7
GTEX-139T8-0011-R5b-SM-5J1MO 240.1
GTEX-Z93S-0011-R5b-SM-4RGNI 239.9
GTEX-11WQC-0011-R5a-SM-5BC74 236.9
GTEX-13112-0011-R5b-SM-5DUV8 234.2
GTEX-NPJ7-0011-R5a-SM-33HBK 228.5
GTEX-144GL-0011-R5b-SM-5PNUJ 227.8
GTEX-RVPU-0011-R5A-SM-2XCAD 227.8
GTEX-11UD1-0011-R5b-SM-5P9FP 227.7
GTEX-YJ89-0011-R5a-SM-4V6GM 195.8
GTEX-13CF2-0011-R5a-SM-5LZWS 188.9
GTEX-1477Z-0011-R5b-SM-5PNUO 180.0
GTEX-S7PM-0011-R5A-SM-3NM8G 177.9
GTEX-145MG-0011-R5b-SM-5S2VU 159.8
GTEX-12WSH-0011-R5b-SM-5P9F3 157.8
GTEX-13FHP-0011-R5b-SM-5LZY2 157.1
GTEX-13NZA-0011-R5b-SM-5KM4K 156.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1450.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1450.7
FF:10379-105H1 89 years, female 1606.9
FF:10164-103B2 76 years, female 1294.6

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