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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:542.8TPM
GTEx:282.1RPKM
FANTOM5:678.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA004426

 

Antibody CAB004647

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

542.8

overview Male, age 65
Sample 1
TPM: 444.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 538.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 639.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 548.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

282.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 282.1
Samples: 88

Max RPKM: 482.9
Min RPKM: 164.7
Std RPKM: 55.8
Median RPKM: 280.1
GTEX-ZQG8-2526-SM-57WEQ 482.9
GTEX-Z9EW-0926-SM-5CVMM 405.9
GTEX-X15G-1426-SM-4PQZK 398.0
GTEX-WFG8-1626-SM-4LVMB 397.9
GTEX-1192X-2526-SM-59868 381.3
GTEX-117YX-0326-SM-5GICL 363.0
GTEX-XMK1-1826-SM-4B66F 354.7
GTEX-131XG-1726-SM-5LZUR 350.9
GTEX-ZF2S-1726-SM-57WFT 348.1
GTEX-ZTPG-2626-SM-57WFX 343.9
GTEX-11NSD-1726-SM-5N9C3 341.2
GTEX-111CU-1326-SM-5NQ8L 334.8
GTEX-ZPIC-2326-SM-57WDW 334.5
GTEX-WRHK-1026-SM-4MVOD 333.2
GTEX-ZZ64-0526-SM-5GZXM 328.5
GTEX-13QBU-1926-SM-5IJEW 327.8
GTEX-13O61-1326-SM-5KM31 327.2
GTEX-ZVT2-2126-SM-5NQ93 325.3
GTEX-13111-1426-SM-5DUW3 324.6
GTEX-Y114-1426-SM-4TT6W 319.9
GTEX-1399S-2026-SM-5KM4B 319.1
GTEX-WFG7-1726-SM-4LVME 317.8
GTEX-13O21-1026-SM-5IJDU 317.2
GTEX-WFJO-0926-SM-4LVM2 316.2
GTEX-145ME-0926-SM-5O9AR 314.1
GTEX-11P7K-1626-SM-5GU63 313.8
GTEX-Y5LM-1626-SM-4VDTB 312.8
GTEX-ZVP2-1726-SM-5GU5P 311.8
GTEX-YEC4-1726-SM-4W21E 306.5
GTEX-Y3IK-1726-SM-4YCCR 305.3
GTEX-XAJ8-0526-SM-47JYK 301.2
GTEX-11P82-0826-SM-5P9GU 300.6
GTEX-VJYA-0926-SM-4KL1N 298.1
GTEX-13113-1226-SM-5EGHT 294.2
GTEX-14E6E-1626-SM-5RQI7 293.9
GTEX-ZTSS-0926-SM-59865 290.3
GTEX-ZQUD-0926-SM-57WE3 289.5
GTEX-ZPCL-1726-SM-57WEO 285.6
GTEX-ZP4G-1626-SM-57WGD 284.1
GTEX-13OVI-1926-SM-5IJCG 283.7
GTEX-13FTW-2026-SM-5IJE2 283.4
GTEX-ZLFU-1526-SM-4WWBT 282.6
GTEX-WEY5-1526-SM-4LMJF 281.0
GTEX-ZYFG-2026-SM-5E43Y 280.3
GTEX-13FH7-1226-SM-5IJFK 279.8
GTEX-ZTX8-0526-SM-59HLD 279.4
GTEX-WH7G-1626-SM-4LVMY 276.0
GTEX-XBED-1426-SM-4AT4G 274.0
GTEX-XXEK-1026-SM-4BRUW 273.4
GTEX-13D11-0726-SM-5LZZB 273.3
GTEX-ZLV1-1126-SM-4WWBW 270.4
GTEX-139YR-2226-SM-5IFFW 269.7
GTEX-14DAR-1426-SM-5RQIR 268.2
GTEX-13PL7-2626-SM-5IFH4 267.3
GTEX-12WSK-1526-SM-5CVNO 266.8
GTEX-11EQ9-1326-SM-5985X 263.1
GTEX-13RTK-0826-SM-5Q5C6 262.4
GTEX-11XUK-1426-SM-5EQMG 261.4
GTEX-11VI4-1626-SM-5EQKO 260.8
GTEX-ZA64-1226-SM-5HL7B 256.9
GTEX-12BJ1-1926-SM-5HL9Z 253.8
GTEX-111YS-1426-SM-5GID8 252.8
GTEX-139T6-1026-SM-5IJGC 250.9
GTEX-VUSG-1726-SM-4KKZL 250.9
GTEX-ZC5H-2326-SM-4WAYT 244.7
GTEX-ZXES-1526-SM-5NQ95 243.3
GTEX-145LT-1026-SM-5LU9O 241.8
GTEX-11DXX-1626-SM-5H11H 240.2
GTEX-XGQ4-1326-SM-4GIDU 240.1
GTEX-1399U-2126-SM-5IFEZ 238.2
GTEX-ZVZP-1826-SM-5GZXB 238.2
GTEX-Y9LG-1626-SM-5IFHM 235.0
GTEX-ZEX8-1826-SM-57WBH 234.2
GTEX-131XF-1326-SM-5GCMQ 229.9
GTEX-YB5E-1526-SM-5IFIE 226.1
GTEX-ZYWO-1526-SM-5SIAL 225.7
GTEX-11I78-1126-SM-5A5K5 224.1
GTEX-148VJ-2226-SM-5NQ9M 217.5
GTEX-1122O-1326-SM-5H11F 217.0
GTEX-X5EB-1626-SM-4E3IV 213.3
GTEX-11DXZ-1326-SM-5H11X 211.3
GTEX-XUZC-1426-SM-4BRV3 205.4
GTEX-YF7O-1826-SM-5IFIU 196.6
GTEX-133LE-1426-SM-5IFH1 185.1
GTEX-1399R-2026-SM-5K7WN 183.3
GTEX-UPK5-2026-SM-4JBIM 183.0
GTEX-WQUQ-2426-SM-4MVNW 170.2
GTEX-13CF3-1226-SM-5LZXN 164.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

678.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 678.5
FF:10024-101D6 15,40,85 years, mixed 678.5

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The Human Protein Atlas project is funded
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