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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:66.9TPM
GTEx:16.0RPKM
FANTOM5:133.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA003267

 

Antibody HPA003326

 

Antibody CAB004352

 

Glandular cells

Medium   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

66.9

overview Male, age 65
Sample 1
TPM: 66.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 73.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 64.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 63.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

16.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 16.0
Samples: 88

Max RPKM: 33.5
Min RPKM: 3.8
Std RPKM: 8
Median RPKM: 14.2
GTEX-ZPCL-1726-SM-57WEO 33.5
GTEX-Y9LG-1626-SM-5IFHM 32.0
GTEX-111YS-1426-SM-5GID8 31.7
GTEX-ZXES-1526-SM-5NQ95 30.9
GTEX-YB5E-1526-SM-5IFIE 29.1
GTEX-11DXZ-1326-SM-5H11X 28.5
GTEX-ZLV1-1126-SM-4WWBW 28.0
GTEX-1122O-1326-SM-5H11F 27.7
GTEX-145LT-1026-SM-5LU9O 27.6
GTEX-13FTW-2026-SM-5IJE2 27.3
GTEX-ZTX8-0526-SM-59HLD 27.1
GTEX-XGQ4-1326-SM-4GIDU 26.6
GTEX-YEC4-1726-SM-4W21E 26.1
GTEX-XXEK-1026-SM-4BRUW 25.8
GTEX-1399R-2026-SM-5K7WN 25.4
GTEX-14DAR-1426-SM-5RQIR 24.8
GTEX-1399S-2026-SM-5KM4B 24.7
GTEX-ZYWO-1526-SM-5SIAL 24.4
GTEX-11P7K-1626-SM-5GU63 24.2
GTEX-ZVZP-1826-SM-5GZXB 24.0
GTEX-ZZ64-0526-SM-5GZXM 23.5
GTEX-11DXX-1626-SM-5H11H 22.6
GTEX-13D11-0726-SM-5LZZB 21.8
GTEX-11EQ9-1326-SM-5985X 21.4
GTEX-ZYFG-2026-SM-5E43Y 21.4
GTEX-11I78-1126-SM-5A5K5 21.2
GTEX-13PL7-2626-SM-5IFH4 20.9
GTEX-ZVT2-2126-SM-5NQ93 20.5
GTEX-YF7O-1826-SM-5IFIU 20.3
GTEX-139YR-2226-SM-5IFFW 19.6
GTEX-ZVP2-1726-SM-5GU5P 19.6
GTEX-WQUQ-2426-SM-4MVNW 19.5
GTEX-131XF-1326-SM-5GCMQ 19.5
GTEX-14E6E-1626-SM-5RQI7 18.4
GTEX-X5EB-1626-SM-4E3IV 18.3
GTEX-13113-1226-SM-5EGHT 17.9
GTEX-ZTSS-0926-SM-59865 17.6
GTEX-133LE-1426-SM-5IFH1 17.0
GTEX-XUZC-1426-SM-4BRV3 16.9
GTEX-13CF3-1226-SM-5LZXN 16.8
GTEX-ZA64-1226-SM-5HL7B 16.8
GTEX-XBED-1426-SM-4AT4G 15.9
GTEX-139T6-1026-SM-5IJGC 15.5
GTEX-ZTPG-2626-SM-57WFX 14.5
GTEX-ZLFU-1526-SM-4WWBT 13.9
GTEX-11XUK-1426-SM-5EQMG 13.8
GTEX-11P82-0826-SM-5P9GU 13.7
GTEX-13FH7-1226-SM-5IJFK 13.2
GTEX-ZEX8-1826-SM-57WBH 13.1
GTEX-13O21-1026-SM-5IJDU 12.6
GTEX-1399U-2126-SM-5IFEZ 12.4
GTEX-WFG7-1726-SM-4LVME 12.4
GTEX-VJYA-0926-SM-4KL1N 12.2
GTEX-WFJO-0926-SM-4LVM2 12.1
GTEX-Y114-1426-SM-4TT6W 12.0
GTEX-11NSD-1726-SM-5N9C3 11.9
GTEX-13RTK-0826-SM-5Q5C6 11.3
GTEX-XAJ8-0526-SM-47JYK 11.2
GTEX-13O61-1326-SM-5KM31 11.2
GTEX-ZPIC-2326-SM-57WDW 10.8
GTEX-Z9EW-0926-SM-5CVMM 10.7
GTEX-11VI4-1626-SM-5EQKO 10.7
GTEX-12BJ1-1926-SM-5HL9Z 10.2
GTEX-145ME-0926-SM-5O9AR 9.4
GTEX-WFG8-1626-SM-4LVMB 9.1
GTEX-ZP4G-1626-SM-57WGD 9.1
GTEX-Y3IK-1726-SM-4YCCR 9.0
GTEX-WRHK-1026-SM-4MVOD 9.0
GTEX-12WSK-1526-SM-5CVNO 8.5
GTEX-WH7G-1626-SM-4LVMY 8.5
GTEX-131XG-1726-SM-5LZUR 8.1
GTEX-13QBU-1926-SM-5IJEW 7.6
GTEX-VUSG-1726-SM-4KKZL 7.3
GTEX-Y5LM-1626-SM-4VDTB 7.2
GTEX-148VJ-2226-SM-5NQ9M 7.2
GTEX-ZQG8-2526-SM-57WEQ 6.8
GTEX-X15G-1426-SM-4PQZK 6.2
GTEX-1192X-2526-SM-59868 6.1
GTEX-UPK5-2026-SM-4JBIM 6.1
GTEX-111CU-1326-SM-5NQ8L 5.6
GTEX-ZF2S-1726-SM-57WFT 5.6
GTEX-ZQUD-0926-SM-57WE3 5.5
GTEX-13OVI-1926-SM-5IJCG 5.4
GTEX-ZC5H-2326-SM-4WAYT 5.2
GTEX-13111-1426-SM-5DUW3 4.3
GTEX-117YX-0326-SM-5GICL 4.0
GTEX-WEY5-1526-SM-4LMJF 3.8
GTEX-XMK1-1826-SM-4B66F 3.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

133.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 133.6
FF:10024-101D6 15,40,85 years, mixed 133.6

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