Tissue expression of ITGBL1 - Summary - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

ITGBL1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	ITGBL1
Gene description	Integrin, beta-like 1 (with EGF-like repeat domains)
Protein class	Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	6
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (gallbladder)
GTEx:	Mixed
FANTOM5:	Mixed

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in several different tissues.

DATA RELIABILITY
Data reliability description	Pending external verification. Secreted protein, tissue location of RNA and protein might differ and correlation is complex.
Reliability score	Uncertain based on 1 antibody. HPA005676
	SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (gallbladder)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Mixed
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	ITGBL1 (HGNC Symbol)
Synonyms	OSCP, TIED
Description	Integrin, beta-like 1 (with EGF-like repeat domains) (HGNC Symbol)
Entrez gene summary	This gene encodes a beta integrin-related protein that is a member of the EGF-like protein family. The encoded protein contains integrin-like cysteine-rich repeats. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2012]
Chromosome	13
Cytoband	q33.1
Chromosome location (bp)	101452593 - 101720856
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000198542 (version 83.38)
Entrez gene	9358
UniProt	O95965 (UniProt - Evidence at transcript level)
neXtProt	NX_O95965
Antibodypedia	ITGBL1 antibodies

PROTEIN BROWSER

ITGBL1-003	ITGBL1-006	ITGBL1-007	ITGBL1-201	ITGBL1-202	ITGBL1-203

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ITGBL1-003 ENSP00000365351 ENST00000376180	O95965 [Direct mapping] Integrin beta-like protein 1 A0A024RDW7 [Target identity:100%; Query identity:100%] Integrin, beta-like 1 (With EGF-like repeat domains), isoform CRA_a Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0007155 [cell adhesion] Show all	494 aa 53.9 kDa	Yes	0
ITGBL1-006 ENSP00000475328 ENST00000490242	U3KPX5 [Direct mapping] Integrin beta-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		208 aa 22.5 kDa	No	0
ITGBL1-007 ENSP00000439903 ENST00000545560	O95965 [Direct mapping] Integrin beta-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0007155 [cell adhesion] Show all	353 aa 38.7 kDa	No	0
ITGBL1-201 ENSP00000365332 ENST00000376162	O95965 [Direct mapping] Integrin beta-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0007155 [cell adhesion] Show all	401 aa 43.9 kDa	No	0
ITGBL1-202 ENSP00000481484 ENST00000618057	A0A087WY35 [Direct mapping] Integrin beta-like protein 1 Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	445 aa 48.5 kDa	Yes	0
ITGBL1-203 ENSP00000481065 ENST00000622834	A0A087WXI7 [Direct mapping] Integrin beta-like protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	401 aa 43.8 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.