We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HMGN2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:287.3TPM
GTEx:61.9RPKM
FANTOM5:35.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody CAB018371

 

Adipocytes

Medium  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 
 

BREAST - HPA RNA-seq

Average TPM

287.3

overview Female, age 52
Sample 1
TPM: 241.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 269.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 390.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 249.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

61.9

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 61.9
Samples: 214

Max RPKM: 113.3
Min RPKM: 20.5
Std RPKM: 20.5
Median RPKM: 62.1
GTEX-R3RS-0626-SM-48FE1 113.3
GTEX-QDT8-0626-SM-48TYW 112.4
GTEX-12ZZX-1126-SM-5EGKB 111.7
GTEX-131YS-0626-SM-5EGKL 110.4
GTEX-YFC4-1426-SM-5IFJG 109.5
GTEX-W5X1-2326-SM-3GIL6 108.6
GTEX-13PL6-2926-SM-5L3I2 108.0
GTEX-13FHO-0826-SM-5L3E8 107.3
GTEX-14ABY-2126-SM-5QGQZ 102.0
GTEX-11EM3-1326-SM-5N9C6 101.6
GTEX-11PRG-0826-SM-5EQ6A 100.2
GTEX-U3ZH-1426-SM-4DXSR 98.8
GTEX-145LT-0726-SM-5S2VM 96.6
GTEX-WYVS-1726-SM-3NMAY 96.3
GTEX-ZTX8-1226-SM-4YCE9 94.0
GTEX-13FTY-2226-SM-5J1ND 92.6
GTEX-TML8-1226-SM-32QON 92.3
GTEX-T6MN-0726-SM-32PML 90.0
GTEX-ZVTK-0326-SM-51MRR 89.5
GTEX-QEG5-0726-SM-4R1JQ 88.2
GTEX-Y5LM-1726-SM-4VDSX 87.9
GTEX-13QIC-2326-SM-5LU5N 87.7
GTEX-11TT1-2126-SM-5GU5Y 87.5
GTEX-ZYW4-0826-SM-5GIDG 87.2
GTEX-VJWN-0726-SM-3GIJ8 87.0
GTEX-RU72-0626-SM-46MUI 86.8
GTEX-11EMC-2026-SM-5A5JV 85.0
GTEX-X15G-1626-SM-3NMB3 84.9
GTEX-Y8LW-1626-SM-5IFHX 84.9
GTEX-131XW-0726-SM-5EGK3 84.7
GTEX-XOT4-0726-SM-4GIAW 84.3
GTEX-11DXW-0626-SM-5N9ER 84.1
GTEX-139TU-0626-SM-5KM3X 83.9
GTEX-ZC5H-2626-SM-5J2MG 83.7
GTEX-13O3Q-2226-SM-5KM4O 82.7
GTEX-Y3IK-2326-SM-4WWDT 82.3
GTEX-XMD1-0826-SM-4AT52 81.5
GTEX-11WQC-1726-SM-5GU4W 80.8
GTEX-ZF2S-2026-SM-5E461 80.7
GTEX-XMD2-0926-SM-4WWEF 80.5
GTEX-ZVT2-1826-SM-5NQ8W 80.2
GTEX-11P7K-0726-SM-5EGKX 80.0
GTEX-13N11-1726-SM-5J1OJ 79.2
GTEX-ZAJG-0626-SM-5HL8X 79.1
GTEX-T5JC-2126-SM-32PMO 79.0
GTEX-T2YK-2226-SM-32QPT 78.5
GTEX-XMK1-1126-SM-4IHJ8 77.6
GTEX-T2IS-1526-SM-32QPR 77.5
GTEX-132NY-0826-SM-5K7Y7 77.3
GTEX-WYJK-1326-SM-3NB2T 77.2
GTEX-13CF2-2026-SM-5K7VI 77.1
GTEX-R55F-1726-SM-2TF4R 76.6
GTEX-ZYFC-0826-SM-5E44K 76.4
GTEX-14AS3-1626-SM-5S2OY 75.8
GTEX-WYBS-0926-SM-3NM94 75.5
GTEX-Q2AG-0326-SM-48U1O 75.3
GTEX-S7SE-0826-SM-4AT4D 73.8
GTEX-ZXES-0826-SM-5E43C 73.5
GTEX-133LE-1726-SM-5K7VQ 73.0
GTEX-ZU9S-1926-SM-5NQBP 73.0
GTEX-Y3I4-1526-SM-4TT7K 72.4
GTEX-ZF29-1926-SM-5S2P1 71.8
GTEX-1313W-0826-SM-5EQ4T 71.7
GTEX-XBED-1626-SM-47JYN 71.3
GTEX-ZVZQ-0826-SM-51MRF 71.2
GTEX-146FH-0826-SM-5SI8T 70.3
GTEX-S4UY-0726-SM-4AD6X 70.0
GTEX-ZTTD-1026-SM-51MRD 69.7
GTEX-13NZB-2126-SM-5MR4Y 69.6
GTEX-147F4-2826-SM-5NQBN 69.4
GTEX-WRHU-0326-SM-3MJFY 69.4
GTEX-111YS-1926-SM-5GICC 68.9
GTEX-U3ZN-1926-SM-4DXSG 68.7
GTEX-Y8E4-1626-SM-5S2MW 68.7
GTEX-ZPIC-1126-SM-5BC7F 68.4
GTEX-11GS4-2126-SM-5A5KR 68.0
GTEX-11NV4-2026-SM-5N9DG 68.0
GTEX-1211K-1926-SM-5EQLB 68.0
GTEX-12KS4-0126-SM-5Q5A5 68.0
GTEX-X4EP-2926-SM-3P5YQ 67.8
GTEX-ZY6K-1626-SM-5GZWV 67.4
GTEX-QEL4-2126-SM-447AE 67.3
GTEX-Y111-2026-SM-4SOJA 67.3
GTEX-ZEX8-2226-SM-57WC6 67.2
GTEX-ZV7C-1826-SM-5NQ83 66.6
GTEX-1314G-1226-SM-5BC6D 66.4
GTEX-XYKS-1326-SM-4BRUN 66.4
GTEX-11P81-1926-SM-5BC53 66.3
GTEX-144GL-2026-SM-5LU3O 66.3
GTEX-11EI6-0626-SM-5985T 66.0
GTEX-S4P3-1326-SM-4AD6V 66.0
GTEX-1117F-2826-SM-5GZXL 65.5
GTEX-YJ8O-2226-SM-5IFHW 65.5
GTEX-ZVE2-1226-SM-5NQ8R 65.2
GTEX-ZA64-1526-SM-5CVMD 64.5
GTEX-13W3W-1226-SM-5LU4H 64.2
GTEX-12WSK-2226-SM-5GCO5 63.9
GTEX-139T8-0826-SM-5L3DE 63.7
GTEX-ZF3C-2326-SM-5S2MZ 63.6
GTEX-11O72-2126-SM-5N9FO 63.4
GTEX-11DXY-2326-SM-5GICW 63.3
GTEX-ZUA1-1526-SM-59HLS 63.3
GTEX-RWS6-1926-SM-47JXY 63.0
GTEX-UJHI-1426-SM-3DB9C 62.7
GTEX-ZYT6-0126-SM-5E45J 62.7
GTEX-S341-1526-SM-4AD6K 62.3
GTEX-145MN-1926-SM-5SIAI 62.2
GTEX-S33H-0326-SM-4AD6N 62.0
GTEX-13NZ8-0126-SM-5IJCT 61.3
GTEX-T5JW-2026-SM-4DM63 60.8
GTEX-U412-1826-SM-4DXTJ 60.8
GTEX-1192X-2326-SM-5987X 60.7
GTEX-11ONC-2126-SM-5HL6E 60.7
GTEX-13NZ9-1026-SM-5MR5K 60.6
GTEX-Y5V5-2126-SM-4WWFO 60.5
GTEX-11LCK-2426-SM-5HL5F 60.4
GTEX-11OF3-1926-SM-59889 60.4
GTEX-WI4N-1426-SM-3LK7H 60.0
GTEX-13O3O-0826-SM-5K7WE 59.7
GTEX-12WSM-1726-SM-5BC6J 59.4
GTEX-1269C-2426-SM-5FQSN 59.3
GTEX-13OW5-2226-SM-5L3HC 59.3
GTEX-ZVT4-1026-SM-57WC4 59.0
GTEX-11ZUS-0826-SM-5FQUY 58.9
GTEX-UPK5-2326-SM-3P5Z8 58.9
GTEX-WOFL-0826-SM-3MJG1 58.9
GTEX-1399U-1826-SM-5PNZ1 58.5
GTEX-12WSB-0626-SM-59HJO 58.4
GTEX-X4XY-0926-SM-4E3JD 58.4
GTEX-ZDXO-0126-SM-5S2ND 57.7
GTEX-11EQ9-1826-SM-5Q5AJ 57.0
GTEX-13D11-1026-SM-5IJFB 56.7
GTEX-VUSG-2226-SM-4KKZO 56.3
GTEX-S32W-2026-SM-4AD6E 56.2
GTEX-X261-0626-SM-3NMD9 56.2
GTEX-11GSO-1926-SM-5A5K3 56.1
GTEX-132Q8-1426-SM-5EGK7 55.3
GTEX-XUJ4-1926-SM-4BOOV 54.3
GTEX-Y9LG-1426-SM-5IFJZ 54.0
GTEX-SIU7-1626-SM-4BRUK 53.4
GTEX-13O3P-0826-SM-5L3DH 53.1
GTEX-ZLV1-1426-SM-4WWES 52.9
GTEX-1122O-1226-SM-5H113 52.8
GTEX-132AR-0826-SM-5EGK6 52.5
GTEX-XQ3S-1326-SM-4BOPQ 52.5
GTEX-ZZPU-0626-SM-5E43T 52.2
GTEX-WXYG-2226-SM-4E3IM 50.9
GTEX-REY6-2426-SM-48FF5 50.5
GTEX-13113-1726-SM-5GCOO 50.1
GTEX-117XS-1926-SM-5GICO 49.5
GTEX-13OW8-0226-SM-5K7UP 48.2
GTEX-Y114-2026-SM-4TT7L 48.2
GTEX-ZAB4-2526-SM-5HL8M 48.0
GTEX-145MO-0826-SM-5NQBL 47.7
GTEX-T6MO-0326-SM-32QOK 47.7
GTEX-XV7Q-2326-SM-4BRVZ 47.1
GTEX-ZYWO-2326-SM-5GZY4 47.1
GTEX-13O61-1826-SM-5KM4I 46.9
GTEX-14753-2426-SM-5LU8U 46.3
GTEX-WFON-1826-SM-3GILG 45.9
GTEX-ZQUD-1926-SM-51MSA 45.9
GTEX-11ZTT-2326-SM-5EQLG 45.6
GTEX-QVJO-1826-SM-447C9 45.4
GTEX-XQ8I-2426-SM-4WAXY 44.9
GTEX-TKQ2-1826-SM-33HB2 44.8
GTEX-13W46-0826-SM-5LU3H 44.7
GTEX-ZDTT-2126-SM-5S2OJ 44.5
GTEX-11DXZ-1926-SM-5GZZL 44.4
GTEX-TMMY-0726-SM-33HBE 43.9
GTEX-11NSD-0926-SM-5N9DR 43.8
GTEX-12WSN-1326-SM-5GCNT 43.1
GTEX-13N1W-0626-SM-5MR4U 42.3
GTEX-145ME-1526-SM-5Q5F2 42.1
GTEX-ZLFU-2126-SM-4WWEV 42.1
GTEX-XUZC-1626-SM-4BRVP 41.4
GTEX-139T6-1626-SM-5PNYZ 41.3
GTEX-SE5C-2126-SM-4BRUJ 40.8
GTEX-12BJ1-1826-SM-5HL9N 40.2
GTEX-R53T-1526-SM-48FEK 39.3
GTEX-Y5V6-2126-SM-4WWFX 39.3
GTEX-13FTW-1426-SM-5LZWZ 38.2
GTEX-S4Q7-1126-SM-4AD6R 38.1
GTEX-XUW1-2326-SM-4BOO5 37.7
GTEX-ZV6S-1826-SM-5NQ8D 36.9
GTEX-11P82-1326-SM-5HL62 36.6
GTEX-117YX-1426-SM-5H12H 36.3
GTEX-11DZ1-0326-SM-5N9BN 36.3
GTEX-YB5K-1626-SM-5IFIN 35.5
GTEX-YFCO-1826-SM-4W1YH 34.9
GTEX-13PVQ-1026-SM-5KM3M 34.3
GTEX-XGQ4-0926-SM-4AT4U 33.9
GTEX-WY7C-2726-SM-3NB3P 33.8
GTEX-11TUW-1826-SM-5BC5D 33.5
GTEX-14E6E-1326-SM-5S2NR 33.5
GTEX-ZQG8-0726-SM-5P9H9 33.4
GTEX-TKQ1-0226-SM-33HB5 33.3
GTEX-UTHO-1026-SM-3GAF7 32.8
GTEX-144GM-0926-SM-5O994 32.1
GTEX-RUSQ-2026-SM-4GIAK 32.0
GTEX-ZWKS-2826-SM-5NQ74 31.9
GTEX-YEC3-1026-SM-5IFI5 31.2
GTEX-13S86-1226-SM-5S2OA 31.0
GTEX-13FTX-1126-SM-5N9EN 30.8
GTEX-ZDYS-1126-SM-5K7UB 30.8
GTEX-YB5E-1726-SM-5IFJ3 30.4
GTEX-QMRM-1626-SM-4R1KV 28.7
GTEX-ZZ64-1226-SM-5E43R 28.6
GTEX-R55D-0826-SM-48FEA 28.5
GTEX-U8XE-0826-SM-4E3J1 28.5
GTEX-13CF3-2126-SM-5IFJP 27.3
GTEX-11I78-2226-SM-5PNYA 26.4
GTEX-PSDG-1626-SM-48TCQ 24.3
GTEX-ZT9W-2026-SM-51MRA 23.9
GTEX-11WQK-2426-SM-5GU5C 20.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

35.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 35.9
FF:10080-102A8 77 years, female 35.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.