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HMGN2
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:31.7RPKM
FANTOM5:42.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:Not detected
 

Antibody staining

Antibody CAB018371

 

Glial cells

High  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

31.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 31.7
Samples: 117

Max RPKM: 53.5
Min RPKM: 14.3
Std RPKM: 7.4
Median RPKM: 31.4
GTEX-QMR6-0011-R5A-SM-32PKT 53.5
GTEX-11H98-0011-R5b-SM-57WCF 52.8
GTEX-P44H-0011-R5A-SM-2XCEX 52.6
GTEX-13X6K-0011-R5b-SM-5PNUE 50.4
GTEX-XMD1-0011-R5A-SM-4AT47 46.4
GTEX-12WSA-0011-R5b-SM-5GU5I 45.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 44.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 44.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 43.7
GTEX-139T8-0011-R5b-SM-5J1MO 40.9
GTEX-12WSB-0011-R5b-SM-5GU67 40.6
GTEX-13JUV-0011-R5a-SM-5LZY5 39.6
GTEX-T6MN-0011-R5A-SM-32QPD 39.6
GTEX-NPJ7-0011-R5a-SM-33HBK 39.5
GTEX-13G51-0011-R5a-SM-5L3EB 39.3
GTEX-TSE9-0011-R5A-SM-3DB7J 39.2
GTEX-13JVG-0011-R5a-SM-5MR4O 39.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 39.0
GTEX-132Q8-0011-R5a-SM-5IJDM 38.9
GTEX-Z93S-0011-R5b-SM-4RGNI 38.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 38.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 38.1
GTEX-1399T-0011-R5b-SM-5IJDK 37.7
GTEX-13OW6-0011-R5a-SM-5O9BK 37.5
GTEX-T5JC-0011-R5A-SM-32PLK 36.9
GTEX-13NYB-0011-R5a-SM-5MR45 36.8
GTEX-WWYW-0011-R5A-SM-3NB3E 36.4
GTEX-WZTO-0011-R5B-SM-3NMC5 36.4
GTEX-N7MT-0011-R5a-SM-2I3G6 36.3
GTEX-ZUA1-0011-R5b-SM-51MTG 35.8
GTEX-11OF3-0011-R5a-SM-57WB4 35.6
GTEX-WVLH-0011-R5A-SM-3MJFW 35.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 35.0
GTEX-139TS-0011-R5b-SM-5J2MZ 34.8
GTEX-139TT-0011-R5b-SM-5K7W8 34.8
GTEX-14BIM-0011-R5b-SM-5S2RM 34.7
GTEX-13FLV-0011-R5a-SM-5LZWT 34.2
GTEX-ZE7O-0011-R5a-SM-57WBO 34.2
GTEX-N7MS-0011-R5a-SM-2HMK8 34.0
GTEX-OHPN-0011-R5A-SM-2I5FF 33.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 33.7
GTEX-YFC4-0011-R5a-SM-4RGLR 33.6
GTEX-T2IS-0011-R5A-SM-32QP4 33.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 33.3
GTEX-RU72-0011-R5A-SM-2TF6U 32.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 32.6
GTEX-131YS-0011-R5b-SM-5K7YB 32.4
GTEX-R55E-0011-R5A-SM-2TC5N 32.4
GTEX-14ABY-0011-R5b-SM-5SI7B 32.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 32.3
GTEX-S7SE-0011-R5A-SM-2XCDA 32.2
GTEX-11WQC-0011-R5a-SM-5BC74 32.1
GTEX-13NYS-0011-R5a-SM-5MR4D 32.1
GTEX-NL4W-0011-R5a-SM-2I3GD 32.1
GTEX-11GSP-0011-R5a-SM-57WBE 31.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 31.8
GTEX-13FXS-0011-R5b-SM-5LZYE 31.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 31.5
GTEX-145LS-0011-R5a-SM-5SI65 31.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 31.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 31.2
GTEX-12WSF-0011-R5a-SM-5HL8K 31.1
GTEX-13FLW-0011-R5a-SM-5LZX6 30.9
GTEX-12ZZX-0011-R5a-SM-5HL89 30.8
GTEX-RVPV-0011-R5A-SM-2TF69 30.8
GTEX-WL46-0011-R5A-SM-3LK6V 30.8
GTEX-RVPU-0011-R5A-SM-2XCAD 30.6
GTEX-ZV68-0011-R5a-SM-4YCDW 30.4
GTEX-11NV4-0011-R5a-SM-5NQ88 30.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 30.3
GTEX-PVOW-0011-R5A-SM-32PL7 30.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 29.9
GTEX-QVJO-0011-R5A-SM-2S1QM 29.1
GTEX-X261-0011-R5A-SM-3NMB4 29.1
GTEX-13CZV-0011-R5a-SM-5K7XA 29.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 28.9
GTEX-145MH-0011-R5a-SM-5P9JT 28.9
GTEX-14BIN-0011-R5b-SM-5SI78 28.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 28.8
GTEX-12WSC-0011-R5b-SM-5CVNS 28.7
GTEX-OXRN-0011-R5A-SM-2I5EF 28.5
GTEX-13OW7-0011-R5b-SM-5O9DM 28.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 28.0
GTEX-12WSH-0011-R5b-SM-5P9F3 27.4
GTEX-13OVH-0011-R5b-SM-5KM4L 27.3
GTEX-13X6I-0011-R5a-SM-5PNWW 27.1
GTEX-13FHP-0011-R5b-SM-5LZY2 26.9
GTEX-XOTO-0011-R5A-SM-4B657 26.9
GTEX-12WSD-0011-R5b-SM-5CVNG 26.7
GTEX-13O3O-0011-R5b-SM-5KM44 26.4
GTEX-ZVT3-0011-R5a-SM-51MSI 26.2
GTEX-13OVL-0011-R5b-SM-5L3FU 26.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 25.9
GTEX-1445S-0011-R5a-SM-5PNUS 25.7
GTEX-ZXG5-0011-R5b-SM-57WBN 25.7
GTEX-13VXU-0011-R5a-SM-5O9D7 25.6
GTEX-13X6J-0011-R5b-SM-5PNWT 24.6
GTEX-1313W-0011-R5b-SM-5L3EP 24.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 24.5
GTEX-X585-0011-R5A-SM-46MVI 24.4
GTEX-X4XX-0011-R5A-SM-46MWN 24.2
GTEX-S7PM-0011-R5A-SM-3NM8G 23.9
GTEX-UTHO-0011-R5A-SM-3GIJD 23.8
GTEX-YJ89-0011-R5a-SM-4V6GM 23.6
GTEX-144GO-0011-R5a-SM-5PNUR 23.4
GTEX-13SLX-0011-R5a-SM-5O9BV 22.3
GTEX-13S7M-0011-R5b-SM-5P9HS 21.9
GTEX-144GL-0011-R5b-SM-5PNUJ 21.9
GTEX-13112-0011-R5b-SM-5DUV8 21.1
GTEX-11UD1-0011-R5b-SM-5P9FP 21.0
GTEX-13CF2-0011-R5a-SM-5LZWS 20.3
GTEX-13CIG-0011-R5b-SM-5L3F2 20.1
GTEX-NL3H-0011-R5a-SM-2I3GB 19.1
GTEX-13OW5-0011-R5b-SM-5L3FR 19.0
GTEX-1477Z-0011-R5b-SM-5PNUO 18.7
GTEX-13NZA-0011-R5b-SM-5KM4K 17.4
GTEX-145MG-0011-R5b-SM-5S2VU 14.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

42.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 42.4
FF:10164-103B2 76 years, female 51.2
FF:10379-105H1 89 years, female 33.6

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