Tissue expression of HMGN2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	200.5	TPM
GTEx:	54.3	RPKM
FANTOM5:	52.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody CAB018371
Squamous epithelial cells	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	200.5

Female, age 70

Sample 1
TPM: 199.4

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 216.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 186.0

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	54.3

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 54.3

Samples: 286

Max RPKM: 134.7
Min RPKM: 22.8
Std RPKM: 17.4
Median RPKM: 51.9

GTEX-133LE-0626-SM-5IFFJ

134.7

GTEX-RU72-0726-SM-46MUW

125.0

GTEX-13X6K-2126-SM-5O9D4

112.3

GTEX-146FQ-1026-SM-5LU8I

104.7

GTEX-XMK1-1326-SM-4B65Q

104.2

GTEX-144FL-2726-SM-5O98Z

100.5

GTEX-RUSQ-0826-SM-47JWW

99.1

GTEX-Y111-1626-SM-57WCY

94.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	52.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 52.2

FF:10015-101C6

68,74,75 years, mixed

52.2