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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:56.1TPM
GTEx:57.3RPKM
FANTOM5:36.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA026681

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA026681

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

56.1
N/A Female, age 80
Sample 1
TPM: 57.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 43.3
N/A Female, age 57
Sample 3
TPM: 48.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 86.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 45.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

57.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 54.9
Samples: 350

Max RPKM: 152.9
Min RPKM: 25.2
Std RPKM: 16
Median RPKM: 52.1
GTEX-Y5V6-2526-SM-5IFJV 152.9
GTEX-XYKS-2726-SM-4E3IC 117.2
GTEX-ZP4G-2326-SM-57WEM 106.5
GTEX-NPJ8-0226-SM-48TBN 98.2
GTEX-WY7C-2426-SM-3NB2V 97.2
GTEX-POMQ-2326-SM-5S2VS 91.1
GTEX-13G51-2626-SM-5LZYW 90.6
GTEX-13VXT-0226-SM-5LU9Q 90.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 61.1
Samples: 227

Max RPKM: 236.9
Min RPKM: 24.5
Std RPKM: 21.5
Median RPKM: 58.3
GTEX-13X6H-1726-SM-5Q5EH 236.9
GTEX-1399S-1426-SM-5PNYQ 160.0
GTEX-Y5LM-0826-SM-4VDSW 138.5
GTEX-ZLWG-0726-SM-5S2NG 118.9
GTEX-1339X-0726-SM-5L3FF 113.5
GTEX-1128S-0926-SM-5GZZU 106.3
GTEX-1122O-0926-SM-5N9C9 101.4
GTEX-11DXX-2026-SM-5EGJL 98.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

36.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 36.4
FF:10010-101C1 65,65,76 years, mixed 36.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.