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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:34.5TPM
GTEx:56.7RPKM
FANTOM5:99.8Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Medium
 

Antibody staining

Antibody HPA026681

 

Bile duct cells

Not detected  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

34.5

N/A Female, age 60
Sample 1
TPM: 45.5
overview Male, age 54
Sample 2
TPM: 41.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 46.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 6.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 11.1
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 30.9
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 19.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 64.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 21.7
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 57.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

56.7

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 56.7
Samples: 119

Max RPKM: 132.3
Min RPKM: 20.8
Std RPKM: 15.5
Median RPKM: 54.7
GTEX-13N11-0926-SM-5IJG2 132.3
GTEX-REY6-1226-SM-48FDR 96.8
GTEX-13SLX-1226-SM-5S2Q6 96.5
GTEX-13NZ9-1326-SM-5MR3V 94.0
GTEX-Y5LM-0426-SM-4VBRO 92.9
GTEX-S32W-1926-SM-4AD63 89.9
GTEX-YB5E-0326-SM-5IFHU 88.6
GTEX-13FTW-1126-SM-5J2NV 80.4
GTEX-UPIC-0926-SM-4IHLV 76.9
GTEX-UTHO-2426-SM-4JBHD 75.1
GTEX-YFC4-1526-SM-5IFJS 74.8
GTEX-13QJC-0726-SM-5RQJK 74.6
GTEX-139TS-1426-SM-5IFJD 73.6
GTEX-QEG4-1826-SM-4R1JN 71.2
GTEX-ZTPG-1426-SM-51MT3 71.0
GTEX-P78B-1326-SM-3P611 70.5
GTEX-13NYB-1026-SM-5IFH3 70.4
GTEX-X4EP-1026-SM-4QAS5 69.8
GTEX-1497J-0726-SM-5Q5D1 69.1
GTEX-X4EO-1126-SM-4QARQ 68.6
GTEX-12KS4-1326-SM-5LUB3 67.7
GTEX-11NUK-1226-SM-5P9GM 67.3
GTEX-QESD-2026-SM-447BI 66.1
GTEX-QEL4-1226-SM-447A4 65.3
GTEX-12WSD-1426-SM-5GCN9 65.2
GTEX-145MF-0826-SM-5QGQA 65.0
GTEX-SJXC-1226-SM-4DM78 65.0
GTEX-12696-0826-SM-5EGGE 64.1
GTEX-1212Z-0226-SM-59HLF 63.7
GTEX-147JS-1126-SM-5RQIW 63.3
GTEX-S4Z8-0526-SM-4AD4T 63.3
GTEX-11GSP-0626-SM-5986T 63.0
GTEX-YECK-1926-SM-4W21H 62.8
GTEX-S33H-1626-SM-4AD68 62.2
GTEX-ZVT3-1626-SM-5GU66 62.1
GTEX-11ZTS-1426-SM-5EQMM 60.9
GTEX-T6MN-1226-SM-3NMA5 60.8
GTEX-14C38-1526-SM-5RQJ7 60.6
GTEX-14A5I-1726-SM-5QGQ5 59.3
GTEX-RN64-1826-SM-48FDV 58.4
GTEX-ZVT4-0626-SM-5E45T 58.4
GTEX-WFON-1726-SM-4LVMQ 58.3
GTEX-ZZPU-0426-SM-5GZYH 58.0
GTEX-139TU-0826-SM-5IJFG 57.9
GTEX-11DXY-0526-SM-5EGGQ 57.6
GTEX-13PVR-0126-SM-5S2PY 57.6
GTEX-RWSA-1426-SM-47JXA 57.4
GTEX-RTLS-1326-SM-46MUN 57.0
GTEX-13112-1426-SM-5EGH8 56.9
GTEX-R53T-0326-SM-48FEC 56.8
GTEX-XOTO-0826-SM-4B65O 56.8
GTEX-13N2G-0926-SM-5IFGJ 56.7
GTEX-13O3O-1826-SM-5IFGW 56.7
GTEX-139YR-0226-SM-5IFEM 56.0
GTEX-ZYT6-0626-SM-5E45V 56.0
GTEX-14DAQ-1726-SM-5S2R2 55.7
GTEX-147F4-1426-SM-5LUA8 55.2
GTEX-131XH-0626-SM-5LZWH 54.8
GTEX-ZAB4-0826-SM-5LU9D 54.8
GTEX-13OW6-2626-SM-5IFF2 54.7
GTEX-11ZUS-2526-SM-59872 54.4
GTEX-13FTZ-0726-SM-5IFFY 54.4
GTEX-145MO-2326-SM-5NQ9K 54.0
GTEX-14AS3-0126-SM-5Q5F4 54.0
GTEX-13113-1326-SM-5GCOI 53.5
GTEX-X261-1726-SM-4PQYT 53.4
GTEX-ZYY3-0626-SM-5NQ6W 53.1
GTEX-13FLV-0326-SM-5N9DJ 52.9
GTEX-Q2AG-1126-SM-48U1P 52.9
GTEX-13VXU-0926-SM-5IFFH 52.8
GTEX-12WSI-0226-SM-5GCNA 52.7
GTEX-QDVN-0826-SM-48TZ2 52.6
GTEX-131YS-1626-SM-5HL6C 52.4
GTEX-12WSL-0226-SM-5CVMJ 51.7
GTEX-146FH-1526-SM-5NQBU 51.7
GTEX-11WQC-0726-SM-5EQMR 51.3
GTEX-14753-1626-SM-5NQ9L 51.3
GTEX-PX3G-0826-SM-48TZS 51.2
GTEX-ZF29-2026-SM-4WWB7 50.7
GTEX-11ZVC-0726-SM-5FQT9 50.3
GTEX-12WSM-0726-SM-5GCOW 50.3
GTEX-ZVP2-0626-SM-51MSO 50.3
GTEX-Q734-0326-SM-48U15 50.1
GTEX-12WSG-0626-SM-5FQTQ 49.9
GTEX-YEC4-0826-SM-5P9FV 49.8
GTEX-WZTO-0626-SM-4PQYY 49.7
GTEX-RNOR-1426-SM-48FDJ 49.6
GTEX-WQUQ-1926-SM-4OOSA 49.6
GTEX-XBEC-1526-SM-4AT68 49.4
GTEX-145LU-1326-SM-5LU9N 49.2
GTEX-Y5V5-0926-SM-4VBPZ 49.2
GTEX-131XE-0326-SM-5LZVO 48.6
GTEX-11EQ9-0526-SM-5A5JZ 48.3
GTEX-1399T-0826-SM-5IFES 47.2
GTEX-132NY-0926-SM-5P9G3 46.8
GTEX-RU72-1426-SM-46MUF 46.7
GTEX-WYVS-1926-SM-4PQZ2 46.6
GTEX-X4XY-1626-SM-46MVN 46.6
GTEX-144GM-1326-SM-5LU5E 45.6
GTEX-14E1K-0326-SM-5S2PE 45.6
GTEX-1269C-0626-SM-5FQSS 44.9
GTEX-13NZB-0626-SM-5IFH6 43.7
GTEX-VUSG-0126-SM-4KL1X 43.3
GTEX-OOBJ-0826-SM-3NB2K 42.9
GTEX-UPK5-1426-SM-4JBHH 42.4
GTEX-11OF3-0726-SM-5BC4Z 41.2
GTEX-TKQ2-1726-SM-4DXUP 40.8
GTEX-ZAB5-0426-SM-5CVMI 40.2
GTEX-11NV4-1326-SM-5HL6V 39.8
GTEX-RM2N-1926-SM-48FCU 39.1
GTEX-ZF2S-3026-SM-4WWCH 39.1
GTEX-11DXZ-0126-SM-5EGGY 38.8
GTEX-1399R-1226-SM-5P9GF 36.1
GTEX-QV44-0326-SM-4R1KD 35.0
GTEX-U3ZN-0226-SM-3DB8D 29.7
GTEX-Z9EW-0426-SM-5CVM9 27.7
GTEX-ZPU1-0826-SM-57WG2 23.8
GTEX-X3Y1-2726-SM-4PQZH 23.6
GTEX-12ZZZ-1326-SM-59HKW 20.8
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

99.8

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 99.8
FF:10018-101C9 64,69,70 years, mixed 99.8

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