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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.5RPKM
FANTOM5:3.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA055431

 

Antibody CAB032435

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

9.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 9.5
Samples: 117

Max RPKM: 53.5
Min RPKM: 0.5
Std RPKM: 11.4
Median RPKM: 4.3
GTEX-OHPN-0011-R5A-SM-2I5FF 53.5
GTEX-X585-0011-R5A-SM-46MVI 49.3
GTEX-NL4W-0011-R5a-SM-2I3GD 49.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 40.9
GTEX-N7MT-0011-R5a-SM-2I3G6 39.0
GTEX-12WSB-0011-R5b-SM-5GU67 37.0
GTEX-13OW5-0011-R5b-SM-5L3FR 34.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 32.7
GTEX-132Q8-0011-R5a-SM-5IJDM 32.6
GTEX-13JUV-0011-R5a-SM-5LZY5 30.7
GTEX-12WSF-0011-R5a-SM-5HL8K 29.7
GTEX-144GO-0011-R5a-SM-5PNUR 28.7
GTEX-WWYW-0011-R5A-SM-3NB3E 27.1
GTEX-13X6I-0011-R5a-SM-5PNWW 27.0
GTEX-XMD1-0011-R5A-SM-4AT47 20.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 19.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 19.2
GTEX-NL3H-0011-R5a-SM-2I3GB 19.1
GTEX-12WSA-0011-R5b-SM-5GU5I 16.7
GTEX-1477Z-0011-R5b-SM-5PNUO 16.2
GTEX-14BIM-0011-R5b-SM-5S2RM 16.2
GTEX-QMR6-0011-R5A-SM-32PKT 16.1
GTEX-QVJO-0011-R5A-SM-2S1QM 15.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 15.0
GTEX-X4XX-0011-R5A-SM-46MWN 14.8
GTEX-139TS-0011-R5b-SM-5J2MZ 13.6
GTEX-T5JC-0011-R5A-SM-32PLK 13.3
GTEX-11H98-0011-R5b-SM-57WCF 13.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 13.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 12.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 12.0
GTEX-145LS-0011-R5a-SM-5SI65 11.6
GTEX-RVPU-0011-R5A-SM-2XCAD 11.4
GTEX-NPJ7-0011-R5a-SM-33HBK 10.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 9.8
GTEX-13OVH-0011-R5b-SM-5KM4L 9.7
GTEX-13X6K-0011-R5b-SM-5PNUE 9.6
GTEX-YFC4-0011-R5a-SM-4RGLR 8.4
GTEX-1399T-0011-R5b-SM-5IJDK 8.3
GTEX-RVPV-0011-R5A-SM-2TF69 8.3
GTEX-13NYS-0011-R5a-SM-5MR4D 8.2
GTEX-P44H-0011-R5A-SM-2XCEX 8.1
GTEX-R55E-0011-R5A-SM-2TC5N 8.0
GTEX-TSE9-0011-R5A-SM-3DB7J 8.0
GTEX-OXRN-0011-R5A-SM-2I5EF 7.9
GTEX-13CZV-0011-R5a-SM-5K7XA 7.5
GTEX-1445S-0011-R5a-SM-5PNUS 6.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 6.6
GTEX-X261-0011-R5A-SM-3NMB4 6.4
GTEX-11NV4-0011-R5a-SM-5NQ88 6.3
GTEX-13CIG-0011-R5b-SM-5L3F2 6.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 5.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 5.5
GTEX-11GSP-0011-R5a-SM-57WBE 5.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 4.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 4.7
GTEX-13OW6-0011-R5a-SM-5O9BK 4.6
GTEX-13G51-0011-R5a-SM-5L3EB 4.5
GTEX-S7SE-0011-R5A-SM-2XCDA 4.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 4.3
GTEX-N7MS-0011-R5a-SM-2HMK8 4.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 4.1
GTEX-11OF3-0011-R5a-SM-57WB4 3.7
GTEX-13FLV-0011-R5a-SM-5LZWT 3.7
GTEX-14ABY-0011-R5b-SM-5SI7B 3.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 3.7
GTEX-13FLW-0011-R5a-SM-5LZX6 3.6
GTEX-UTHO-0011-R5A-SM-3GIJD 3.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 3.5
GTEX-12WSC-0011-R5b-SM-5CVNS 3.4
GTEX-131YS-0011-R5b-SM-5K7YB 3.4
GTEX-ZV68-0011-R5a-SM-4YCDW 3.4
GTEX-T2IS-0011-R5A-SM-32QP4 3.3
GTEX-Z93S-0011-R5b-SM-4RGNI 3.3
GTEX-RU72-0011-R5A-SM-2TF6U 3.1
GTEX-WL46-0011-R5A-SM-3LK6V 2.9
GTEX-11WQC-0011-R5a-SM-5BC74 2.8
GTEX-12WSH-0011-R5b-SM-5P9F3 2.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 2.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 2.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 2.7
GTEX-1313W-0011-R5b-SM-5L3EP 2.7
GTEX-145MH-0011-R5a-SM-5P9JT 2.6
GTEX-T6MN-0011-R5A-SM-32QPD 2.6
GTEX-WVLH-0011-R5A-SM-3MJFW 2.6
GTEX-ZVT3-0011-R5a-SM-51MSI 2.6
GTEX-13VXU-0011-R5a-SM-5O9D7 2.5
GTEX-139TT-0011-R5b-SM-5K7W8 2.4
GTEX-13NZA-0011-R5b-SM-5KM4K 2.3
GTEX-13OVL-0011-R5b-SM-5L3FU 2.3
GTEX-12ZZX-0011-R5a-SM-5HL89 2.2
GTEX-13FXS-0011-R5b-SM-5LZYE 2.2
GTEX-13X6J-0011-R5b-SM-5PNWT 2.2
GTEX-PVOW-0011-R5A-SM-32PL7 2.0
GTEX-13FHP-0011-R5b-SM-5LZY2 1.9
GTEX-13SLX-0011-R5a-SM-5O9BV 1.7
GTEX-ZE7O-0011-R5a-SM-57WBO 1.7
GTEX-ZXG5-0011-R5b-SM-57WBN 1.6
GTEX-13JVG-0011-R5a-SM-5MR4O 1.5
GTEX-144GL-0011-R5b-SM-5PNUJ 1.5
GTEX-S7PM-0011-R5A-SM-3NM8G 1.5
GTEX-ZUA1-0011-R5b-SM-51MTG 1.5
GTEX-13OW7-0011-R5b-SM-5O9DM 1.4
GTEX-13S7M-0011-R5b-SM-5P9HS 1.4
GTEX-YJ89-0011-R5a-SM-4V6GM 1.3
GTEX-12WSD-0011-R5b-SM-5CVNG 1.2
GTEX-139T8-0011-R5b-SM-5J1MO 1.2
GTEX-14BIN-0011-R5b-SM-5SI78 1.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 1.1
GTEX-WZTO-0011-R5B-SM-3NMC5 0.9
GTEX-13CF2-0011-R5a-SM-5LZWS 0.8
GTEX-13O3O-0011-R5b-SM-5KM44 0.8
GTEX-13NYB-0011-R5a-SM-5MR45 0.7
GTEX-145MG-0011-R5b-SM-5S2VU 0.7
GTEX-11UD1-0011-R5b-SM-5P9FP 0.6
GTEX-13112-0011-R5b-SM-5DUV8 0.6
GTEX-XOTO-0011-R5A-SM-4B657 0.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

3.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 3.1
FF:10164-103B2 76 years, female 4.0
FF:10379-105H1 89 years, female 2.2

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