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Term
Gene name

Class

Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

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Score

Score

Score

Antibodies

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BRD2
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

BRD2

Gene description

Bromodomain containing 2

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

9
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Nuclear expression in several different tissues, with the highest level in spermatogonia in testis.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA042816
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

BRD2 (HGNC Symbol)

Synonyms

D6S113E, FSRG1, KIAA9001, NAT, RING3

Description

Bromodomain containing 2 (HGNC Symbol)

Entrez gene summary

This gene encodes a transcriptional regulator that belongs to the BET (bromodomains and extra terminal domain) family of proteins. This protein associates with transcription complexes and with acetylated chromatin during mitosis, and it selectively binds to the acetylated lysine-12 residue of histone H4 via its two bromodomains. The gene maps to the major histocompatability complex (MHC) class II region on chromosome 6p21.3, but sequence comparison suggests that the protein is not involved in the immune response. This gene has been implicated in juvenile myoclonic epilepsy, a common form of epilepsy that becomes apparent in adolescence. Multiple alternatively spliced variants have been described for this gene. [provided by RefSeq, Dec 2010]

Chromosome

6

Cytoband

p21.32

Chromosome location (bp)

32968660 - 32981505

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000204256 (version 83.38)

Entrez gene

6046

UniProt

P25440 (UniProt - Evidence at protein level)

neXtProt

NX_P25440

Antibodypedia

BRD2 antibodies

PROTEIN BROWSER

BRD2-001
BRD2-002
BRD2-005
BRD2-006
BRD2-008
BRD2-009
BRD2-023
BRD2-026
BRD2-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

BRD2-001
ENSP00000363958
ENST00000374825
P25440 [Direct mapping]
Bromodomain-containing protein 2
A0A024RCR5 [Target identity:100%; Query identity:100%]
Bromodomain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006334 [nucleosome assembly]
GO:0006351 [transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0007283 [spermatogenesis]
GO:0016568 [chromatin modification]
GO:0070577 [lysine-acetylated histone binding]
Show all
801 aa
88.1 kDa
No 0
BRD2-002
ENSP00000363964
ENST00000374831
P25440 [Direct mapping]
Bromodomain-containing protein 2
A0A024RCR5 [Target identity:100%; Query identity:100%]
Bromodomain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006334 [nucleosome assembly]
GO:0006351 [transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0007283 [spermatogenesis]
GO:0016568 [chromatin modification]
GO:0070577 [lysine-acetylated histone binding]
Show all
801 aa
88.1 kDa
No 0
BRD2-005
ENSP00000378702
ENST00000395287
P25440 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006334 [nucleosome assembly]
GO:0006351 [transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0007283 [spermatogenesis]
GO:0016568 [chromatin modification]
GO:0070577 [lysine-acetylated histone binding]
Show all
836 aa
92 kDa
No 0
BRD2-006
ENSP00000409613
ENST00000449025
H0Y6K2 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
807 aa
88.3 kDa
No 0
BRD2-008
ENSP00000464077
ENST00000496118
J3QR72 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
162 aa
17.5 kDa
No 0
BRD2-009
ENSP00000411195
ENST00000456339
H0Y799 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
296 aa
32.1 kDa
No 0
BRD2-023
ENSP00000475691
ENST00000607833
U3KQA6 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
552 aa
61.2 kDa
No 0
BRD2-026
ENSP00000475288
ENST00000606059
U3KPW0 [Direct mapping]
Bromodomain-containing protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
159 aa
17.1 kDa
No 0
BRD2-201
ENSP00000409145
ENST00000449085
P25440 [Direct mapping]
Bromodomain-containing protein 2
X5CF57 [Target identity:100%; Query identity:100%]
BRD2
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006334 [nucleosome assembly]
GO:0006351 [transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0007283 [spermatogenesis]
GO:0016568 [chromatin modification]
GO:0070577 [lysine-acetylated histone binding]
Show all
754 aa
83.2 kDa
No 0

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