Fields »
ABOUT
HELP
BLOG
LSM2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.8TPM
GTEx:20.7RPKM
FANTOM5:42.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:High
 
 
 

Antibody staining

Antibody HPA066718

  

Fibroblasts

 High  
    
    
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA066718

  

Adipocytes

 Low  

Fibroblasts

 High  

Peripheral nerve

 Medium  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

3.8
N/A Female, age 80
Sample 1
TPM: 4.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 2.9
N/A Female, age 57
Sample 3
TPM: 2.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 5.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 3.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

20.7

GTEx sample id

RPKM
18.321.324.59.633.2051015202530354045
 
18.321.324.59.633.2051015202530354045

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 21.6
Samples: 350

Max RPKM: 49.4
Min RPKM: 9.6
Std RPKM: 5.1
Median RPKM: 21.3
GTEX-13G51-2626-SM-5LZYW 49.4
GTEX-147GR-0426-SM-5S2OL 40.1
GTEX-13FHP-0226-SM-5K7WD 38.7
GTEX-Y5V6-2526-SM-5IFJV 37.7
GTEX-13OVL-0326-SM-5IJCS 36.3
GTEX-1399T-2726-SM-5K7XK 35.7
GTEX-139T4-0126-SM-5HL5G 35.6
GTEX-111FC-0226-SM-5N9B8 34.1
Show all
15.418.622.47.732.8051015202530354045
 
15.418.622.47.732.8051015202530354045

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 19.2
Samples: 227

Max RPKM: 49.6
Min RPKM: 7.7
Std RPKM: 5.5
Median RPKM: 18.6
GTEX-13X6H-1726-SM-5Q5EH 49.6
GTEX-ZYVF-1026-SM-5E44V 39.8
GTEX-YJ89-1926-SM-5IFJ6 35.6
GTEX-1399S-1426-SM-5PNYQ 34.5
GTEX-1212Z-0526-SM-5FQSQ 33.3
GTEX-1128S-0926-SM-5GZZU 32.8
GTEX-ZE7O-1526-SM-5J1NH 30.7
GTEX-11PRG-1526-SM-5HL6Z 29.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

42.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 42.6
FF:10010-101C1 65,65,76 years, mixed 42.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.