Fields »
ABOUT
HELP
BLOG
PRRC2A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.6TPM
GTEx:38.4RPKM
FANTOM5:99.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA046791

  

Antibody CAB026383

  

Endothelial cells

 Low   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

5.6
overview Male, age 54
Sample 1
TPM: 0.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 4.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 0.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 10.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 0.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 0.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 14.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 0.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 25.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 7.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 0.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

38.4

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 42.7
Samples: 149

Max RPKM: 57.1
Min RPKM: 27.3
Std RPKM: 5.4
Median RPKM: 42.5
GTEX-13O1R-2426-SM-5KLZZ 57.1
GTEX-1339X-1726-SM-5P9J9 56.4
GTEX-11TUW-2326-SM-5EQMO 55.8
GTEX-11I78-1326-SM-5PNY9 55.3
GTEX-14A5H-1626-SM-5SIAN 52.3
GTEX-12WSL-1826-SM-5LZW9 51.7
GTEX-XAJ8-0726-SM-47JY5 51.1
GTEX-ZPU1-1726-SM-4WWFV 50.7
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 35.1
Samples: 196

Max RPKM: 62.2
Min RPKM: 12.7
Std RPKM: 7.8
Median RPKM: 34.9
GTEX-11TUW-2026-SM-5EQL8 62.2
GTEX-X5EB-0926-SM-46MVT 53.5
GTEX-ZYVF-2826-SM-5GIDK 52.9
GTEX-QLQ7-1126-SM-4R1KN 52.1
GTEX-XAJ8-0426-SM-47JYJ 51.0
GTEX-11WQK-2126-SM-5EQME 50.6
GTEX-XXEK-1926-SM-4BRVD 49.6
GTEX-WEY5-1426-SM-4LMJ3 49.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

99.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 99.8
FF:10014-101C5 62,83,84 years, mixed 99.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.