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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:5.8TPM
GTEx:35.6RPKM
FANTOM5:86.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA046791

 

Antibody CAB026383

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

5.8

overview Male, age 65
Sample 1
TPM: 9.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 6.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 0.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 7.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

35.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 35.6
Samples: 88

Max RPKM: 64.8
Min RPKM: 17.3
Std RPKM: 9.6
Median RPKM: 33.4
GTEX-UPK5-2026-SM-4JBIM 64.8
GTEX-ZC5H-2326-SM-4WAYT 57.5
GTEX-X15G-1426-SM-4PQZK 54.6
GTEX-11VI4-1626-SM-5EQKO 53.1
GTEX-WFJO-0926-SM-4LVM2 52.8
GTEX-WH7G-1626-SM-4LVMY 52.4
GTEX-VUSG-1726-SM-4KKZL 51.6
GTEX-11NSD-1726-SM-5N9C3 51.6
GTEX-131XG-1726-SM-5LZUR 49.5
GTEX-WEY5-1526-SM-4LMJF 46.7
GTEX-11P82-0826-SM-5P9GU 46.3
GTEX-Z9EW-0926-SM-5CVMM 46.0
GTEX-13111-1426-SM-5DUW3 46.0
GTEX-13O61-1326-SM-5KM31 45.2
GTEX-111CU-1326-SM-5NQ8L 45.0
GTEX-ZLFU-1526-SM-4WWBT 44.5
GTEX-117YX-0326-SM-5GICL 44.3
GTEX-ZP4G-1626-SM-57WGD 44.2
GTEX-ZF2S-1726-SM-57WFT 43.9
GTEX-148VJ-2226-SM-5NQ9M 43.8
GTEX-XAJ8-0526-SM-47JYK 43.7
GTEX-11XUK-1426-SM-5EQMG 43.4
GTEX-ZVP2-1726-SM-5GU5P 43.4
GTEX-145ME-0926-SM-5O9AR 43.0
GTEX-ZQUD-0926-SM-57WE3 42.8
GTEX-WRHK-1026-SM-4MVOD 42.3
GTEX-XMK1-1826-SM-4B66F 42.3
GTEX-13FH7-1226-SM-5IJFK 42.3
GTEX-ZEX8-1826-SM-57WBH 40.5
GTEX-WFG8-1626-SM-4LVMB 40.3
GTEX-1399U-2126-SM-5IFEZ 40.2
GTEX-1192X-2526-SM-59868 40.0
GTEX-12BJ1-1926-SM-5HL9Z 38.5
GTEX-WFG7-1726-SM-4LVME 38.1
GTEX-12WSK-1526-SM-5CVNO 36.7
GTEX-13QBU-1926-SM-5IJEW 36.5
GTEX-1399S-2026-SM-5KM4B 36.3
GTEX-ZQG8-2526-SM-57WEQ 36.2
GTEX-14E6E-1626-SM-5RQI7 35.7
GTEX-11P7K-1626-SM-5GU63 35.4
GTEX-13RTK-0826-SM-5Q5C6 34.8
GTEX-139T6-1026-SM-5IJGC 33.8
GTEX-11I78-1126-SM-5A5K5 33.4
GTEX-ZTPG-2626-SM-57WFX 33.4
GTEX-ZVT2-2126-SM-5NQ93 33.4
GTEX-XGQ4-1326-SM-4GIDU 33.2
GTEX-XXEK-1026-SM-4BRUW 32.3
GTEX-Y114-1426-SM-4TT6W 32.3
GTEX-ZZ64-0526-SM-5GZXM 32.0
GTEX-11DXX-1626-SM-5H11H 32.0
GTEX-13CF3-1226-SM-5LZXN 31.7
GTEX-13O21-1026-SM-5IJDU 30.8
GTEX-XBED-1426-SM-4AT4G 30.7
GTEX-1399R-2026-SM-5K7WN 30.5
GTEX-13OVI-1926-SM-5IJCG 30.4
GTEX-11EQ9-1326-SM-5985X 30.2
GTEX-Y3IK-1726-SM-4YCCR 30.1
GTEX-11DXZ-1326-SM-5H11X 30.0
GTEX-131XF-1326-SM-5GCMQ 30.0
GTEX-145LT-1026-SM-5LU9O 29.9
GTEX-XUZC-1426-SM-4BRV3 29.9
GTEX-Y5LM-1626-SM-4VDTB 29.8
GTEX-VJYA-0926-SM-4KL1N 29.7
GTEX-13113-1226-SM-5EGHT 29.6
GTEX-133LE-1426-SM-5IFH1 29.6
GTEX-139YR-2226-SM-5IFFW 29.5
GTEX-WQUQ-2426-SM-4MVNW 29.0
GTEX-ZPIC-2326-SM-57WDW 29.0
GTEX-ZLV1-1126-SM-4WWBW 27.9
GTEX-13FTW-2026-SM-5IJE2 27.7
GTEX-ZXES-1526-SM-5NQ95 27.2
GTEX-ZYWO-1526-SM-5SIAL 27.0
GTEX-ZTX8-0526-SM-59HLD 26.8
GTEX-YF7O-1826-SM-5IFIU 25.8
GTEX-ZYFG-2026-SM-5E43Y 25.8
GTEX-13D11-0726-SM-5LZZB 25.4
GTEX-ZTSS-0926-SM-59865 25.0
GTEX-ZVZP-1826-SM-5GZXB 24.9
GTEX-YB5E-1526-SM-5IFIE 24.4
GTEX-ZA64-1226-SM-5HL7B 24.2
GTEX-14DAR-1426-SM-5RQIR 24.0
GTEX-X5EB-1626-SM-4E3IV 23.6
GTEX-Y9LG-1626-SM-5IFHM 23.1
GTEX-13PL7-2626-SM-5IFH4 23.1
GTEX-1122O-1326-SM-5H11F 21.1
GTEX-ZPCL-1726-SM-57WEO 20.6
GTEX-YEC4-1726-SM-4W21E 18.3
GTEX-111YS-1426-SM-5GID8 17.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

86.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 86.2
FF:10024-101D6 15,40,85 years, mixed 86.2

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