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Gene name

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Reliability

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Method

Validation

Method

Validation

Method

Validation

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Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA049234

 

Provider

Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA049234  

Host species

Rabbit  

Clonality

pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

 

Released in version

10  

References

2  

VALIDATION SUMMARY

 
 

Antibody HPA049234

 
Immunohistochemistry


Validated
 
Western blot

Uncertain  
Protein array

Supported  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA049234

 

Formal validation: Orthogonal

Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 

 

 

 

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 44 cell lines.  
 

Standard validation

Supported  

 

Figure description

Immunohistochemical staining of human spleen shows strong cytoplasmic positivity in cells in red pulp.  

Expression

RNA: detected in 35 tissues
Protein: detected in 23 cell types
 

Retrieval

HIER pH6  

Antibody dilution

1:400  

Literature conformity

Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA049234

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

 

Figure description

 

Target mass (kDa)

18, 16.7  

Antibody dilution

1:100  

PROTEIN ARRAY

 
 

Antibody HPA049234

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

 

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:5900  

ANTIGEN INFORMATION

 
 

Antibody HPA049234

 

Antigen

Recombinant protein fragment  

Length (aa)

25  

Antigen sequence

DEINKQFLDDPKYSSDEDLPSKLEG
 

Matching transcripts

AIF1-001 - ENSP00000365227 [100%]
AIF1-004 - ENSP00000338776 [100%]
 

Other gene match

 
ANTIGEN VIEW
AIF1-001
AIF1-004

RELEVANT PUBLICATIONS

 
 

Antibody HPA049234

 

1.

Cortical neurons are a prominent source of the proinflammatory cytokine osteopontin in HIV-associated neurocognitive disorders
Silva K et al
J Neurovirol 2015;21(2):174-85
 

2.

Dorsal root ganglia in Friedreich ataxia: satellite cell proliferation and inflammation
Koeppen AH et al
Acta Neuropathol Commun 2016;4(1):46
 
 

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