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ZSCAN5CP

GENERAL INFORMATION

Gene name

 ZSCAN5CP

Gene description

 Zinc finger and SCAN domain containing 5C, pseudogene

Protein class

 Predicted intracellular proteins
Transcription factors

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Not detected
GTEx:Not detected

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression in selected tissues, most abundant in Leydig cells of testis.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly not consistent with RNA expression data. No RNA expression data detected and pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.

Reliability score

 Uncertain based on 3 antibodies.
HPA041263 , HPA043123 , HPA046836
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

Placenta

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Not detected
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Not detected

GENE INFORMATION

Gene name

 ZSCAN5CP (HGNC Symbol)

Synonyms

 ZNF495C, ZSCAN5C

Description

 Zinc finger and SCAN domain containing 5C, pseudogene (HGNC Symbol)

Entrez gene summary

Chromosome

 19

Cytoband

 q13.43

Chromosome location (bp)

 56202301 - 56209452

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000204532 (version 83.38)

Entrez gene

UniProt

 A6NGD5 (UniProt - Uncertain)

neXtProt

 NX_A6NGD5

Antibodypedia

 ZSCAN5CP antibodies

PROTEIN BROWSER
ZSCAN5CP-001
ZSCAN5CP-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
ZSCAN5CP-001
ENSP00000435234
ENST00000534327
A6NGD5 [Direct mapping]
Putative zinc finger and SCAN domain-containing protein 5C
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Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
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GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003676 [nucleic acid binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0046872 [metal ion binding]
Show all
 496 aa
55.7 kDa 		No 0
ZSCAN5CP-201
ENSP00000365443
ENST00000376267
A6NGD5 [Direct mapping]
Putative zinc finger and SCAN domain-containing protein 5C
Show all
Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0003676 [nucleic acid binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0046872 [metal ion binding]
Show all
 496 aa
55.7 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.