Tissue expression of ATXN2 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	34.7	TPM
GTEx:	8.7	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Medium
Neuronal cells:	High
Neuropil:	Not detected

Antibody staining	Antibody HPA018295	Antibody HPA020339	Antibody HPA021146
Endothelial cells	Not detected	Not detected	Low
Glial cells	Medium	Medium	High
Neuronal cells	High	High	High
Neuropil	Not detected	Low	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	34.7

Male, age 5

Sample 1
TPM: 34.5

Female, age 40

Sample 2
TPM: 31.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 38.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	8.7

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 9.2

Samples: 114

Max RPKM: 12.5
Min RPKM: 5
Std RPKM: 1.5
Median RPKM: 9.2

GTEX-13FXS-3126-SM-5J2NN

12.5

GTEX-12ZZY-3026-SM-5GCOU

12.3

GTEX-13NYC-2826-SM-5K7WR

12.1

GTEX-11OF3-2926-SM-5HL78

12.0

GTEX-13NYS-3126-SM-5KLYV

11.9

GTEX-14BMV-3026-SM-5S2PQ

11.7

GTEX-111FC-3126-SM-5GZZ2

11.6

GTEX-13G51-3026-SM-5IJB8

11.5

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 8.1

Samples: 108

Max RPKM: 12.5
Min RPKM: 3.3
Std RPKM: 1.7
Median RPKM: 8.4

GTEX-QDT8-0011-R10A-SM-32PKG

12.5

GTEX-X4XX-0011-R10B-SM-46MWO

11.3

GTEX-13FHO-0011-R10b-SM-5J2MM

11.1

GTEX-13CZV-0011-R10b-SM-5LZYD

10.8

GTEX-NPJ8-0011-R10A-SM-2YUMO

10.8

GTEX-131XH-0011-R10a-SM-5EGLJ

10.5

GTEX-145LS-0011-R10a-SM-5PNUQ

10.4

GTEX-Q2AG-0011-R10A-SM-2HMLA

10.4

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue