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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.0TPM
GTEx:5.9RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA062452

  

Antibody HPA063471

  

Antibody CAB025487

  

Antibody CAB025538

  

Endothelial cells

 Low   Not detected   Not detected   Not detected  

Glandular cells

 Medium   Medium   Medium   Not detected  

Peripheral nerve/ganglion

 Not detected  
          
       
       
       

COLON - HPA RNA-seq

Average TPM

0.0
overview Male, age 54
Sample 1
TPM: 0.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 0.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 0.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 0.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 0.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 0.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 0.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 0.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 0.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 0.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 0.0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 0.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.9

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 6.0
Samples: 149

Max RPKM: 166.4
Min RPKM: 0
Std RPKM: 15.8
Median RPKM: 2.2
GTEX-14A5I-2426-SM-5Q5CP 166.4
GTEX-ZAB4-2426-SM-5HL8A 55.6
GTEX-117YX-0526-SM-5EGJH 48.8
GTEX-Z93S-2626-SM-57WBX 47.9
GTEX-146FH-2426-SM-5Q5EW 39.4
GTEX-ZVZQ-2626-SM-59HLB 27.5
GTEX-ZP4G-1526-SM-57WE5 21.9
GTEX-WYVS-1126-SM-4SOJX 21.0
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 5.8
Samples: 196

Max RPKM: 169.8
Min RPKM: 0
Std RPKM: 13.5
Median RPKM: 3.6
GTEX-11DXZ-1726-SM-5H12M 169.8
GTEX-TKQ2-1326-SM-4DXT9 57.5
GTEX-YEC4-1926-SM-5IFHJ 43.2
GTEX-Y114-1526-SM-4TT79 38.6
GTEX-139T6-1326-SM-5IFFO 20.3
GTEX-12C56-0626-SM-5EGGC 19.0
GTEX-11P7K-1526-SM-5EGI7 18.3
GTEX-13PL7-2526-SM-5IFGR 18.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.