Tissue expression of PKHD1L1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	1.5	TPM
GTEx:	3.7	RPKM
FANTOM5:	2.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected

Antibody staining	Antibody HPA044458
Adipocytes	Not detected
Fibroblasts	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA044458
Adipocytes	Not detected
Chondrocytes	Low
Fibroblasts	Low
Peripheral nerve	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	1.5

Female, age 80

Sample 1
TPM: 0.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 0.8

Female, age 57

Sample 3
TPM: 0.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 3.9

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 2.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	3.7

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 0.8

Samples: 350

Max RPKM: 12.2
Min RPKM: 0
Std RPKM: 1.2
Median RPKM: 0.4

GTEX-1211K-2226-SM-5FQU6

12.2

GTEX-13OVI-1326-SM-5IJBO

5.5

GTEX-WI4N-1126-SM-3LK7Q

5.4

GTEX-11UD1-0226-SM-5EQKL

5.3

GTEX-WFON-2226-SM-3TW8W

4.7

GTEX-11EQ9-2526-SM-5HL66

4.6

GTEX-13N11-2626-SM-5K7UQ

4.4

GTEX-Y8LW-1926-SM-4WWFZ

4.4

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 8.2

Samples: 227

Max RPKM: 41.2
Min RPKM: 0
Std RPKM: 8.7
Median RPKM: 5

GTEX-XLM4-1026-SM-4AT51

41.2

GTEX-12ZZW-2326-SM-5DUW2

39.4

GTEX-13W46-1226-SM-5SIAS

34.0

GTEX-WYVS-0626-SM-4SOJY

32.9

GTEX-ZGAY-1326-SM-5S2NS

32.7

GTEX-13S7M-0826-SM-5QGQX

31.6

GTEX-14753-2526-SM-5LU97

30.9

GTEX-139TU-1426-SM-5LZY9

30.7

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	2.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 2.7

FF:10010-101C1

65,65,76 years, mixed

2.7