Tissue expression of HMGN1 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	121.1	TPM
GTEx:	39.4	RPKM
FANTOM5:	68.4	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

High

Antibody staining	Antibody HPA048694	Antibody CAB012260
Glandular cells	Medium	High

SMALL INTESTINE - HPA RNA-seq

Average TPM	121.1

Male, age 65

Sample 1
TPM: 104.7

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 134.9

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 140.3

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 104.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	39.4

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 39.4

Samples: 88

Max RPKM: 73.3
Min RPKM: 16.9
Std RPKM: 10.7
Median RPKM: 37

GTEX-11P82-0826-SM-5P9GU

73.3

GTEX-11VI4-1626-SM-5EQKO

69.5

GTEX-WRHK-1026-SM-4MVOD

66.7

GTEX-X15G-1426-SM-4PQZK

60.4

GTEX-UPK5-2026-SM-4JBIM

59.5

GTEX-WFJO-0926-SM-4LVM2

59.0

GTEX-13FH7-1226-SM-5IJFK

57.1

GTEX-13O61-1326-SM-5KM31

55.3

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	68.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 68.4

FF:10024-101D6

15,40,85 years, mixed

68.4