Fields »
ABOUT
HELP
BLOG
HBA1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:142.2TPM
GTEx:64.1RPKM
FANTOM5:0.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA043780

  

Antibody CAB032534

  

Adipocytes

 High   Medium  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA043780

  

Antibody CAB032534

  

Adipocytes

 Not detected   Medium  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

142.2
N/A Female, age 80
Sample 1
TPM: 89.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 148.8
N/A Female, age 57
Sample 3
TPM: 160.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 116.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 196.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

64.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 35.4
Samples: 350

Max RPKM: 2185.7
Min RPKM: 0.2
Std RPKM: 128.9
Median RPKM: 13.1
GTEX-11ZU8-2426-SM-5EQMV 2185.7
GTEX-13O3P-0226-SM-5KM3Z 731.7
GTEX-NL3G-0226-SM-4RGLU 384.6
GTEX-11ONC-2526-SM-5986W 304.7
GTEX-1128S-2126-SM-5H12U 264.2
GTEX-11TTK-0226-SM-5N9EC 246.8
GTEX-13SLW-0226-SM-5S2NA 245.8
GTEX-13VXT-0226-SM-5LU9Q 218.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 108.4
Samples: 227

Max RPKM: 1737.6
Min RPKM: 0.1
Std RPKM: 224.1
Median RPKM: 37
GTEX-ZVE2-1826-SM-51MRZ 1737.6
GTEX-12584-2126-SM-5FQUM 1701.7
GTEX-WWTW-1326-SM-4MVNT 1329.6
GTEX-ZYVF-1026-SM-5E44V 1166.1
GTEX-XQ8I-1426-SM-4BOPW 937.6
GTEX-113JC-0726-SM-5GZZR 769.0
GTEX-ZC5H-1626-SM-5HL7L 602.1
GTEX-14BIL-2426-SM-5QGQR 489.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

0.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 0.1
FF:10010-101C1 65,65,76 years, mixed 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.