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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 47.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 346.7
Min RPKM: 3.5
Std RPKM: 48.4
Median RPKM: 15.4
GTEX-1445S-3026-SM-5O9BR
346.7
GTEX-13OVJ-2826-SM-5L3GW
295.0
GTEX-1192X-3126-SM-5N9BY
210.6
GTEX-11ONC-2926-SM-5P9JM
143.7
GTEX-12ZZW-2926-SM-5LZUP
101.4
GTEX-NPJ8-1526-SM-2D7VU
96.8
GTEX-11TTK-2926-SM-5PNYP
80.6
GTEX-144FL-3026-SM-5O99C
75.6
GTEX-PWO3-0926-SM-2I5EY
75.2
GTEX-145MG-3026-SM-5RQJA
70.1
GTEX-QVUS-2826-SM-3GADB
68.7
GTEX-QVJO-1426-SM-2S1QY
66.0
GTEX-11EMC-3226-SM-5EGKW
61.3
GTEX-OXRN-2426-SM-2I5EQ
54.3
GTEX-13FHO-3026-SM-5J1O9
52.0
GTEX-13QIC-2926-SM-5J2NF
46.9
GTEX-145MF-2726-SM-5O995
46.0
GTEX-1117F-3226-SM-5N9CT
42.5
GTEX-132Q8-3026-SM-5PNVG
41.1
GTEX-131XW-3126-SM-5LZUC
39.7
GTEX-139T8-1026-SM-5J2MC
38.7
GTEX-144GL-3026-SM-5Q5CW
38.3
GTEX-145LS-3126-SM-5Q5BY
33.4
GTEX-WHSE-3026-SM-3P5ZH
33.1
GTEX-13NYS-3126-SM-5KLYV
31.7
GTEX-13OW8-2826-SM-5L3GC
30.8
GTEX-13JUV-2926-SM-5LZX7
29.9
GTEX-ZZPT-3026-SM-5GZXH
29.4
GTEX-13X6J-3026-SM-5Q5CU
27.2
GTEX-11GS4-3126-SM-5A5LH
26.6
GTEX-XOTO-3026-SM-4B65M
25.4
GTEX-11GSP-3226-SM-5986O
25.2
GTEX-1399T-3026-SM-5KLZC
24.5
GTEX-ZE7O-3126-SM-5HL5X
24.0
GTEX-Q2AG-2926-SM-2HMJ3
23.6
GTEX-T5JC-2426-SM-3NMDB
23.2
GTEX-13O3Q-2926-SM-5KM45
22.8
GTEX-14A5I-2926-SM-5Q5CQ
22.8
GTEX-11O72-2926-SM-5BC4V
20.9
GTEX-11WQK-3026-SM-5EQL6
20.8
GTEX-12WSD-3126-SM-5HL7P
20.7
GTEX-1128S-2726-SM-5H12C
20.3
GTEX-13JVG-3126-SM-5L3FH
19.7
GTEX-13OVH-3026-SM-5MR4N
19.5
GTEX-13S7M-3126-SM-5RQJQ
19.4
GTEX-ZAJG-3126-SM-5HL9J
19.0
GTEX-13SLX-3126-SM-5S2Q5
18.9
GTEX-XLM4-3026-SM-4AT6L
18.8
GTEX-13FXS-3126-SM-5J2NN
18.1
GTEX-NPJ7-2726-SM-2I3FT
17.7
GTEX-13IVO-2926-SM-5L3CZ
17.6
GTEX-13PVQ-3026-SM-5SI93
17.2
GTEX-WWYW-3126-SM-3NB39
17.2
GTEX-1313W-3126-SM-5LZUI
16.8
GTEX-X4XX-3026-SM-3NMB2
16.7
GTEX-147GR-3026-SM-5S2ML
16.2
GTEX-13FLW-1426-SM-5K7YE
15.8
GTEX-11NV4-2126-SM-5N9DS
15.1
GTEX-WL46-2926-SM-3LK82
14.7
GTEX-T6MN-2626-SM-32PMQ
14.1
GTEX-Y8DK-0826-SM-4TT3T
13.9
GTEX-11OC5-0726-SM-5P9JK
13.8
GTEX-13NYC-2826-SM-5K7WR
13.7
GTEX-YJ89-3026-SM-5IFJI
13.7
GTEX-13PL6-3126-SM-5LUAR
13.6
GTEX-WVLH-3026-SM-3MJG9
13.4
GTEX-ZUA1-3026-SM-59HJC
13.2
GTEX-13VXU-2926-SM-5LU5C
12.9
GTEX-13X6K-2926-SM-5Q5D5
12.2
GTEX-11EI6-3026-SM-5GZZO
12.1
GTEX-YFC4-3126-SM-5PNV6
11.9
GTEX-14BMV-3026-SM-5S2PQ
11.8
GTEX-11OF3-2926-SM-5HL78
11.4
GTEX-ZYFD-3026-SM-5E44C
11.2
GTEX-RU72-3026-SM-5SI7Y
11.1
GTEX-117XS-3026-SM-5N9CA
10.6
GTEX-Z93S-2926-SM-57WB9
10.6
GTEX-T2IS-3026-SM-32QPM
10.5
GTEX-12126-1026-SM-5P9JJ
10.2
GTEX-11ZUS-2926-SM-5FQSL
10.1
GTEX-WZTO-2926-SM-3NM9I
9.9
GTEX-ZVT3-3026-SM-5E43N
9.9
GTEX-12ZZZ-3026-SM-5BC67
9.7
GTEX-N7MT-1126-SM-5SI7V
9.7
GTEX-TSE9-3026-SM-3DB76
9.3
GTEX-12WSA-2926-SM-5EQ4D
9.2
GTEX-X585-3026-SM-46MWF
9.1
GTEX-ZAK1-3026-SM-5S2MJ
9.1
GTEX-13OW7-3026-SM-5L3GY
9.0
GTEX-145MH-3026-SM-5Q5DZ
9.0
GTEX-QMR6-1426-SM-32PLA
8.8
GTEX-UTHO-3026-SM-3GAFB
8.6
GTEX-11GSO-2926-SM-5HL73
8.5
GTEX-13FHP-3026-SM-5IJBS
8.3
GTEX-11PRG-2926-SM-5987A
8.2
GTEX-12WSH-3026-SM-5CVNI
8.0
GTEX-R55F-1326-SM-5S2V4
7.7
GTEX-111FC-3126-SM-5GZZ2
7.2
GTEX-Y111-2726-SM-4TT3N
6.9
GTEX-QDT8-2926-SM-32PKC
6.8
GTEX-13O3O-3126-SM-5KM3H
6.7
GTEX-13G51-3026-SM-5IJB8
6.6
GTEX-PVOW-2526-SM-2XCF7
6.4
GTEX-131YS-3126-SM-5KLYT
6.3
GTEX-13NYB-3026-SM-5IJD7
6.3
GTEX-12ZZY-3026-SM-5GCOU
6.2
GTEX-14ASI-3026-SM-5S2PN
6.1
GTEX-RNOR-2326-SM-2TF4I
6.1
GTEX-13OW6-3026-SM-5J2MI
6.0
GTEX-11DXW-1126-SM-5H12Q
5.6
GTEX-11DXY-3226-SM-5GIDE
5.1
GTEX-12WSC-3026-SM-5GCNF
4.8
GTEX-12ZZX-2926-SM-5GCOQ
4.8
GTEX-11NUK-2926-SM-5A5MD
3.5
Show all
Brain - Frontal Cortex (BA9)
Brain - Frontal Cortex (BA9) RPKM: 24.3
Samples: 108
Max RPKM: 142.4
Min RPKM: 3
Std RPKM: 24.5
Median RPKM: 14.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
142.4
GTEX-1445S-0011-R10a-SM-5PNWB
116.2
GTEX-11H98-0011-R10b-SM-5NQ98
100.2
GTEX-1477Z-0011-R10b-SM-5S2RF
93.4
GTEX-13SLW-0011-R10a-SM-5S2UI
87.2
GTEX-11ZUS-0011-R10b-SM-5BC79
83.7
GTEX-X4EP-0011-R10B-SM-4QASJ
72.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
71.9
GTEX-S7SE-0011-R10A-SM-2XCDF
58.3
GTEX-131XW-0011-R10a-SM-5DUVA
55.0
GTEX-14753-0011-R10b-SM-5S2WE
50.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
46.4
GTEX-11GSP-0011-R10a-SM-5NQ7J
45.4
GTEX-145MG-0011-R10a-SM-5PNWG
45.0
GTEX-13CZV-0011-R10b-SM-5LZYD
44.8
GTEX-RVPU-0011-R10A-SM-2XCAH
44.2
GTEX-NL4W-0011-R10A-SM-2I3DY
41.8
GTEX-X261-0011-R10B-SM-4E3JT
38.8
GTEX-13QIC-0011-R10a-SM-5O9C7
37.8
GTEX-OXRO-0011-R10A-SM-2I5EH
37.7
GTEX-13NYS-0011-R10a-SM-5MR4S
35.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
34.5
GTEX-147F4-0011-R10b-SM-5S2WC
33.9
GTEX-13FHO-0011-R10b-SM-5J2MM
33.5
GTEX-OXRN-0011-R10A-SM-2I5GC
31.3
GTEX-13JVG-0011-R10b-SM-5KM2P
31.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
29.6
GTEX-QVUS-0011-R10A-SM-3GIK3
27.7
GTEX-XMD1-0011-R10A-SM-4AT4A
27.7
GTEX-ZV68-0011-R10a-SM-51MT7
27.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
27.2
GTEX-ZF28-0011-R10a-SM-4WWEH
26.8
GTEX-N7MT-0011-R10A-SM-2I3E1
26.3
GTEX-13IVO-0011-R10a-SM-5LZY3
24.7
GTEX-145LS-0011-R10a-SM-5PNUQ
24.4
GTEX-P44H-0011-R10A-SM-2XCEK
24.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
24.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
23.1
GTEX-13NZA-0011-R10b-SM-5KM54
23.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
22.9
GTEX-ZUA1-0011-R10a-SM-51MT6
22.8
GTEX-12WSF-0011-R10a-SM-5LZVH
21.4
GTEX-14BIL-0011-R10a-SM-5SI75
21.4
GTEX-13O3O-0011-R10a-SM-5LUA9
20.8
GTEX-11WQK-0011-R10a-SM-5BC6R
20.5
GTEX-13X6I-0011-R10a-SM-5PNWI
19.9
GTEX-13QJC-0011-R10a-SM-5SI63
18.8
GTEX-13SLX-0011-R10a-SM-5P9HV
18.5
GTEX-ZVT3-0011-R10b-SM-57WB6
18.1
GTEX-12WSE-0011-R10b-SM-5P9JV
16.9
GTEX-ZXG5-0011-R10a-SM-57WDD
15.7
GTEX-13FXS-0011-R10a-SM-5J2MA
15.0
GTEX-13OW8-0011-R10a-SM-5L3H6
14.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
14.9
GTEX-N7MS-0011-R10A-SM-2HMJK
14.5
GTEX-13JUV-0011-R10b-SM-5LZXR
14.4
GTEX-NL3H-0011-R10A-SM-2I3E9
14.4
GTEX-TSE9-0011-R10A-SM-3DB7O
14.2
GTEX-WWYW-0011-R10A-SM-3NB35
14.1
GTEX-13X6J-0011-R10b-SM-5PNWA
14.0
GTEX-T5JC-0011-R10A-SM-32PM2
13.5
GTEX-145LU-0011-R10a-SM-5PNWJ
12.5
GTEX-Z93S-0011-R10a-SM-4RGNM
12.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
11.9
GTEX-12WSD-0011-R10b-SM-5GU79
11.7
GTEX-XLM4-0011-R10A-SM-4AT5P
11.5
GTEX-13OW7-0011-R10a-SM-5L3H3
11.4
GTEX-145MH-0011-R10b-SM-5PNUK
11.2
GTEX-QMR6-0011-R10A-SM-32PKO
11.1
GTEX-147GR-0011-R10b-SM-5S2UM
11.0
GTEX-12WSA-0011-R10b-SM-5P9ET
10.9
GTEX-X4XX-0011-R10B-SM-46MWO
10.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
10.7
GTEX-YFC4-0011-R10a-SM-4SOK5
10.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
10.3
GTEX-13FLW-0011-R10b-SM-5LZZF
10.2
GTEX-WVLH-0011-R10A-SM-3MJFM
10.1
GTEX-T6MN-0011-R10A-SM-32QP7
10.0
GTEX-13S7M-0011-R10b-SM-5PNZB
9.6
GTEX-13G51-0011-R10b-SM-5LZYF
9.4
GTEX-14BIN-0011-R10a-SM-5S2UA
9.3
GTEX-13X6K-0011-R10a-SM-5P9JR
9.2
GTEX-YJ89-0011-R10a-SM-4SOK9
9.1
GTEX-WL46-0011-R10A-SM-3MJFQ
8.8
GTEX-131XH-0011-R10a-SM-5EGLJ
8.3
GTEX-X585-0011-R10A-SM-46MUY
8.1
GTEX-12WSC-0011-R10a-SM-5GU57
7.8
GTEX-13N1W-0011-R10b-SM-5MR4H
7.8
GTEX-11WQC-0011-R10a-SM-57WCT
7.4
GTEX-13O3Q-0011-R10b-SM-5KM39
7.4
GTEX-13OVL-0011-R10a-SM-5L3GS
7.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
7.2
GTEX-WZTO-0011-R10B-SM-4E3KB
7.2
GTEX-12WSH-0011-R10a-SM-5LZUS
7.1
GTEX-1313W-0011-R10b-SM-5DUXA
7.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
6.6
GTEX-13OW6-0011-R10a-SM-5L3HE
5.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
5.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
5.6
GTEX-131YS-0011-R10b-SM-5EQ5N
5.4
GTEX-12WSM-0011-R10a-SM-5DUWV
5.3
GTEX-13N2G-0011-R10a-SM-5MR34
5.3
GTEX-QDT8-0011-R10A-SM-32PKG
5.0
GTEX-139TS-0011-R10a-SM-5K7TU
4.7
GTEX-13NYB-0011-R10a-SM-5KM43
4.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
3.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
3.1
GTEX-12126-0011-R10b-SM-5BC6T
3.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.