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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 5911.8
Min RPKM: 17.2
Std RPKM: 924.7
Median RPKM: 235.6
GTEX-XQ8I-1726-SM-4BOQB
5911.8
GTEX-POMQ-0126-SM-48TD6
4378.0
GTEX-UPK5-1626-SM-4JBHI
2452.1
GTEX-U3ZN-0126-SM-4DXUM
2308.2
GTEX-11P7K-0426-SM-5BC5H
2290.6
GTEX-QV44-0126-SM-4R1KH
2282.7
GTEX-146FQ-0626-SM-5LU9U
2214.2
GTEX-YB5E-0426-SM-5IFHR
2213.1
GTEX-QLQW-0126-SM-447BK
2179.0
GTEX-ZAB5-0526-SM-5CVMU
2171.9
GTEX-11EQ9-0426-SM-5A5JY
2022.8
GTEX-13S86-0126-SM-5S2PI
2011.1
GTEX-11VI4-0126-SM-5GU6Z
1832.7
GTEX-Z9EW-0726-SM-5HL9H
1579.4
GTEX-PX3G-0926-SM-48U12
1564.9
GTEX-PLZ6-0126-SM-48TC6
1525.9
GTEX-ZV6S-0826-SM-5NQ6Z
1407.8
GTEX-WFON-0126-SM-4LVM9
1273.7
GTEX-139YR-0426-SM-5IFFV
1198.8
GTEX-R55G-0226-SM-48FEI
1193.9
GTEX-14DAR-0326-SM-5S2PS
1083.1
GTEX-11P81-1326-SM-5GU5S
1070.8
GTEX-XPVG-0626-SM-4B65B
909.8
GTEX-YEC4-0126-SM-4W21T
788.3
GTEX-12WSG-0926-SM-5EGIH
774.0
GTEX-146FR-1926-SM-5NQA6
736.4
GTEX-Q734-0226-SM-48U1A
684.9
GTEX-ZZPU-0126-SM-5E446
641.0
GTEX-PW2O-0126-SM-48TC8
619.9
GTEX-13PL7-1126-SM-5MR5O
579.6
GTEX-QDVN-0526-SM-48TZ4
576.4
GTEX-13N11-0126-SM-5KM2Z
576.3
GTEX-P4PP-0926-SM-48TBZ
558.9
GTEX-ZLFU-0526-SM-4WWBN
558.7
GTEX-147F3-0126-SM-5NQBJ
530.9
GTEX-12WSK-0126-SM-5GCO7
481.4
GTEX-ZYFG-0726-SM-5GIDX
458.0
GTEX-VJYA-0126-SM-4KL1P
412.0
GTEX-Y3I4-0126-SM-4TT26
392.8
GTEX-139T6-0226-SM-5IFGZ
382.0
GTEX-X3Y1-0126-SM-4PQZA
381.1
GTEX-131XE-1126-SM-5EGHW
375.4
GTEX-P4QS-0926-SM-48TBS
358.8
GTEX-ZDTT-1026-SM-5KM19
353.7
GTEX-13VXT-1326-SM-5LU3Y
346.1
GTEX-QV31-0126-SM-447BP
332.9
GTEX-YFCO-0926-SM-5LUA5
323.0
GTEX-W5WG-0626-SM-4SOID
295.4
GTEX-O5YT-0926-SM-48TDG
281.0
GTEX-13U4I-1626-SM-5IFFR
279.2
GTEX-132QS-0226-SM-5IFFZ
246.9
GTEX-12WSJ-0526-SM-5GCOZ
238.3
GTEX-117YX-2126-SM-5GIEL
232.9
GTEX-U3ZH-0126-SM-4DXUK
232.2
GTEX-Y3IK-0126-SM-4WWE9
230.9
GTEX-13X6H-0726-SM-5Q5BX
218.3
GTEX-S4Z8-0226-SM-4AD5K
210.0
GTEX-ZLWG-0426-SM-4WWFA
196.4
GTEX-XMK1-0126-SM-4B65F
191.1
GTEX-12WSN-0126-SM-5DUX5
189.1
GTEX-12BJ1-0726-SM-5EGGF
185.0
GTEX-1399S-0226-SM-5IFFG
176.3
GTEX-XGQ4-0126-SM-4AT4H
176.3
GTEX-ZVP2-0526-SM-51MSC
168.3
GTEX-OIZH-0926-SM-48TBR
162.3
GTEX-144GN-2126-SM-5O99D
161.7
GTEX-XXEK-0126-SM-4BRVU
161.3
GTEX-11LCK-0126-SM-5A5M5
152.6
GTEX-X4LF-0226-SM-4QAS8
140.4
GTEX-145MN-0126-SM-5RQHY
135.3
GTEX-1399R-0226-SM-5IJGG
117.8
GTEX-RUSQ-0126-SM-47JWV
114.7
GTEX-XAJ8-0126-SM-47JYG
114.2
GTEX-ZPU1-1026-SM-4YCEQ
114.1
GTEX-T5JW-0126-SM-4DM6K
112.1
GTEX-Q2AH-0226-SM-48U1I
110.6
GTEX-QMRM-0226-SM-4R1K7
107.0
GTEX-1122O-0526-SM-5N9DM
103.3
GTEX-13CF3-0226-SM-5J1NW
103.3
GTEX-11XUK-0426-SM-5EQML
102.6
GTEX-Y5LM-0326-SM-4VBRN
102.0
GTEX-X585-1826-SM-4QAS3
97.6
GTEX-OOBJ-0926-SM-48TDO
97.2
GTEX-XV7Q-0126-SM-4BRVK
96.8
GTEX-11NSD-0426-SM-5N9CR
94.2
GTEX-UJHI-0126-SM-4IHLP
84.5
GTEX-WHWD-0126-SM-4OORS
81.7
GTEX-XUJ4-0226-SM-4BOP8
79.1
GTEX-ZP4G-0326-SM-4YCEF
70.6
GTEX-Y8LW-0126-SM-4VBS1
65.9
GTEX-1211K-0426-SM-5FQTP
64.0
GTEX-ZVZP-0726-SM-59HKA
56.6
GTEX-11DXX-0726-SM-5H12X
54.6
GTEX-U4B1-0526-SM-4DXTK
52.6
GTEX-ZYWO-0226-SM-5GZX3
52.1
GTEX-QCQG-0226-SM-48U28
51.2
GTEX-131XG-0426-SM-5IFGD
49.4
GTEX-13111-0126-SM-5EGHO
41.0
GTEX-YB5K-1926-SM-4VDT4
40.9
GTEX-S3XE-0626-SM-4AD6B
37.8
GTEX-Y114-0726-SM-4TT6U
33.4
GTEX-14E6E-1226-SM-5S2R5
22.6
GTEX-13PVR-0326-SM-5RQJY
22.5
GTEX-13FH7-1326-SM-5IFG8
17.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.