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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 461.1
Min RPKM: 0
Std RPKM: 36.7
Median RPKM: 2.7
GTEX-ZYVF-2726-SM-5GID4
461.1
GTEX-ZV7C-1626-SM-5NQ7E
142.5
GTEX-14BMV-2226-SM-5RQHX
77.5
GTEX-ZE7O-3026-SM-51MS4
76.4
GTEX-RTLS-2626-SM-46MUJ
72.0
GTEX-145MO-2226-SM-5Q5BN
70.5
GTEX-139D8-2326-SM-5IFGE
46.8
GTEX-144GM-1726-SM-5O9AS
44.5
GTEX-13QJ3-2726-SM-5SI6L
43.9
GTEX-11EI6-2426-SM-5PNVS
41.8
GTEX-145LT-1426-SM-5O9B3
40.0
GTEX-139YR-1926-SM-5LZXM
39.6
GTEX-145MN-1326-SM-5NQ9S
39.3
GTEX-QDVN-1226-SM-48TZ5
39.0
GTEX-UPK5-2126-SM-4JBJK
38.6
GTEX-ZVT3-2126-SM-59HL2
36.4
GTEX-WZTO-2126-SM-4PQYW
34.1
GTEX-13RTK-0226-SM-5RQHR
33.1
GTEX-12WSD-2326-SM-59HKQ
32.4
GTEX-ZXES-1426-SM-5NQ8S
30.4
GTEX-146FR-2026-SM-5NQAI
26.1
GTEX-XQ8I-2026-SM-4BOOL
25.3
GTEX-145ME-1026-SM-5O9B4
25.0
GTEX-144GN-1226-SM-5O991
24.7
GTEX-ZA64-0826-SM-5HL9U
22.2
GTEX-13O3Q-2126-SM-5KM4C
20.2
GTEX-11GSP-2126-SM-5HL5E
18.7
GTEX-ZT9W-1526-SM-4YCDE
18.0
GTEX-13S7M-1826-SM-5RQK6
17.9
GTEX-11WQK-2626-SM-5EQ4K
15.8
GTEX-ZVT2-1626-SM-51MRC
15.3
GTEX-11EM3-1026-SM-5A5KL
15.1
GTEX-Y3IK-1426-SM-4YCES
14.1
GTEX-ZYY3-1726-SM-5EGH3
14.1
GTEX-12WSG-2026-SM-5FQUU
12.4
GTEX-132AR-2426-SM-5IFFD
11.9
GTEX-P4PQ-1526-SM-3NMCK
11.8
GTEX-XUZC-0726-SM-4BOPH
11.7
GTEX-T5JC-1926-SM-4DM6Q
11.6
GTEX-S95S-0826-SM-4B64N
9.9
GTEX-QV44-1226-SM-4R1KE
9.7
GTEX-ZQUD-0826-SM-57WDQ
9.7
GTEX-XBED-1226-SM-4AT5V
9.6
GTEX-ZAB4-1526-SM-5CVN7
9.5
GTEX-O5YW-1526-SM-3MJGL
9.1
GTEX-P4QT-1526-SM-3NMCT
9.1
GTEX-OOBJ-1526-SM-3NB1Q
9.0
GTEX-OXRK-1626-SM-3NB17
8.7
GTEX-P78B-1826-SM-3P5YX
8.7
GTEX-PLZ6-0826-SM-3P61K
8.7
GTEX-PW2O-1226-SM-48TCH
8.6
GTEX-XPVG-1526-SM-4B66C
7.8
GTEX-13N1W-2026-SM-5K7YU
7.3
GTEX-11P82-0726-SM-5PNYL
7.1
GTEX-POMQ-0826-SM-3P61H
7.1
GTEX-P4PP-1526-SM-3P61M
6.7
GTEX-R55G-1126-SM-48FDG
6.7
GTEX-RWS6-0926-SM-47JXE
6.3
GTEX-XAJ8-0326-SM-47JYI
6.3
GTEX-117YW-2226-SM-5N9DB
5.9
GTEX-XUJ4-1226-SM-4BOPD
5.6
GTEX-13U4I-2526-SM-5SI8Z
5.2
GTEX-13O61-1126-SM-5L3FI
5.1
GTEX-Y5V6-1326-SM-4VDTF
5.1
GTEX-13CF3-1926-SM-5K7WF
5.0
GTEX-X15G-1126-SM-4PQZG
5.0
GTEX-ZLFU-1326-SM-4WWET
5.0
GTEX-OIZH-1526-SM-3NB1J
4.9
GTEX-Y8LW-0826-SM-4WWDO
4.8
GTEX-12696-1726-SM-5EQLH
4.6
GTEX-XXEK-0826-SM-4BRWG
4.6
GTEX-Y5LM-1326-SM-5RQIS
4.6
GTEX-ZLV1-0826-SM-4WWEQ
4.6
GTEX-RU1J-0526-SM-46MUT
4.5
GTEX-YFCO-0826-SM-5LUAG
4.4
GTEX-NFK9-1526-SM-3LK7B
4.3
GTEX-PX3G-1526-SM-48U11
4.2
GTEX-11TT1-0726-SM-5GU5A
4.1
GTEX-Y8E4-1526-SM-4WWDI
4.1
GTEX-SNOS-0826-SM-4DM5N
4.0
GTEX-T6MO-0726-SM-4DM58
4.0
GTEX-OHPK-1526-SM-3MJGM
3.9
GTEX-XV7Q-1326-SM-4BRWM
3.9
GTEX-QXCU-1926-SM-48FE4
3.8
GTEX-1399U-1626-SM-5P9J3
3.6
GTEX-13113-0726-SM-5LZUF
3.3
GTEX-ZPU1-1626-SM-4WWB2
3.3
GTEX-11P7K-1726-SM-5GU6F
3.2
GTEX-QMRM-1126-SM-447BN
3.2
GTEX-ZTX8-0426-SM-59HLG
3.2
GTEX-T8EM-1226-SM-4DM5J
3.0
GTEX-YJ8A-1526-SM-5P9FT
3.0
GTEX-13PVQ-2126-SM-5L3FW
2.9
GTEX-ZP4G-1226-SM-4WWCJ
2.9
GTEX-146FH-2126-SM-5SI9U
2.8
GTEX-13FTX-0726-SM-5N9BI
2.7
GTEX-U4B1-1026-SM-4DXT1
2.7
GTEX-11EQ9-1226-SM-5987E
2.5
GTEX-13D11-2126-SM-5IFH2
2.5
GTEX-Q2AI-0826-SM-48TZO
2.5
GTEX-11NUK-2426-SM-5BC4U
2.4
GTEX-QLQW-0726-SM-447AA
2.2
GTEX-QV31-0626-SM-447C5
2.2
GTEX-Y9LG-1026-SM-5IFJN
2.2
GTEX-132QS-1826-SM-5IFFN
2.1
GTEX-12WSJ-0926-SM-5P9JD
1.9
GTEX-S4Z8-1226-SM-4AD6W
1.9
GTEX-SUCS-0926-SM-4DM4Z
1.9
GTEX-11NSD-1426-SM-5HL67
1.8
GTEX-13OW6-2526-SM-5IJEC
1.8
GTEX-QLQ7-0826-SM-447B3
1.8
GTEX-S4Q7-0726-SM-4AD5F
1.8
GTEX-WEY5-1226-SM-4LMIQ
1.8
GTEX-WH7G-1526-SM-4LVMX
1.8
GTEX-1211K-1426-SM-5FQTF
1.7
GTEX-1339X-1426-SM-5K7YO
1.7
GTEX-1399S-1626-SM-5P9GI
1.7
GTEX-12C56-0526-SM-5FQST
1.6
GTEX-13OVI-2426-SM-5KM4J
1.6
GTEX-ZF2S-1426-SM-57WET
1.6
GTEX-11DXX-1326-SM-5GIDZ
1.5
GTEX-QCQG-0526-SM-48U2A
1.4
GTEX-SIU7-1426-SM-4BRWT
1.4
GTEX-U8T8-1226-SM-4E3IH
1.4
GTEX-R55C-1026-SM-48FCM
1.3
GTEX-T5JW-0926-SM-4DM5K
1.3
GTEX-WHWD-1426-SM-4OORU
1.3
GTEX-12WSK-1426-SM-5CVNN
1.2
GTEX-S341-0626-SM-4AD5T
1.2
GTEX-131XG-1226-SM-5EGH9
1.1
GTEX-QDVJ-1426-SM-48U1Y
1.1
GTEX-V1D1-1726-SM-4JBHB
1.1
GTEX-Q734-1026-SM-48U16
1.0
GTEX-R55D-1526-SM-48FEJ
1.0
GTEX-SNMC-0626-SM-4DM6H
1.0
GTEX-ZV6S-0926-SM-57WGB
0.9
GTEX-1122O-1926-SM-5EGIQ
0.8
GTEX-PWCY-0926-SM-48TD7
0.8
GTEX-YEC4-1426-SM-5IFHS
0.8
GTEX-12BJ1-1726-SM-5HL9B
0.7
GTEX-PWN1-1526-SM-48TDA
0.7
GTEX-13QBU-1126-SM-5LU44
0.6
GTEX-ZPIC-2026-SM-57WG3
0.6
GTEX-13111-1226-SM-5GCNC
0.5
GTEX-1399R-1126-SM-5IFIO
0.5
GTEX-S4UY-1626-SM-4AD55
0.5
GTEX-S7SF-0626-SM-4AD4V
0.5
GTEX-TKQ1-0526-SM-4DXTG
0.5
GTEX-UJMC-1226-SM-4IHLI
0.5
GTEX-WFON-1126-SM-4LVMA
0.5
GTEX-WHPG-0426-SM-4M1XW
0.5
GTEX-Y3I4-1626-SM-4TT7W
0.5
GTEX-111CU-0926-SM-5EGIK
0.4
GTEX-131XE-2226-SM-5PNYX
0.4
GTEX-13FTW-1726-SM-5KM2B
0.4
GTEX-PWOO-1226-SM-48TCO
0.4
GTEX-R53T-1226-SM-48FCT
0.4
GTEX-RM2N-0826-SM-48FD3
0.4
GTEX-U3ZN-2026-SM-4DXUC
0.4
GTEX-UJHI-1026-SM-4IHJP
0.4
GTEX-VJYA-1026-SM-4KL21
0.4
GTEX-ZY6K-0726-SM-5A5L8
0.4
GTEX-11VI4-0326-SM-5EQ6L
0.3
GTEX-131XF-1226-SM-5HL8V
0.3
GTEX-133LE-1326-SM-5IFGO
0.3
GTEX-Q2AH-1126-SM-48TZM
0.3
GTEX-S4P3-0726-SM-4AD57
0.3
GTEX-TKQ2-0926-SM-4DXU5
0.3
GTEX-WFG7-1326-SM-4LMK1
0.3
GTEX-WFG8-1326-SM-4LVN3
0.3
GTEX-WFJO-1126-SM-4LVLZ
0.3
GTEX-Y114-1226-SM-4TT88
0.3
GTEX-111YS-1126-SM-5GZYQ
0.2
GTEX-11I78-1726-SM-5A5M3
0.2
GTEX-14BMU-1126-SM-5RQJ8
0.2
GTEX-S3XE-1026-SM-4AD4O
0.2
GTEX-ZZ64-0426-SM-5E43F
0.2
GTEX-ZZPU-1426-SM-5GZZ6
0.2
GTEX-117YX-1026-SM-5H11V
0.1
GTEX-13X6H-1626-SM-5Q5CT
0.1
GTEX-TMMY-1626-SM-4DXTY
0.1
GTEX-UPIC-1826-SM-4IHKC
0.1
GTEX-XBEW-1826-SM-4RTWX
0.1
GTEX-ZDYS-1926-SM-5HL59
0.1
GTEX-ZVZP-1726-SM-5GZWY
0.1
GTEX-ZYFG-1326-SM-5GICJ
0.1
GTEX-13FH7-1026-SM-5IJGF
0.0
GTEX-13O21-0926-SM-5IFGT
0.0
GTEX-V955-1326-SM-4JBHR
0.0
GTEX-W5WG-1726-SM-4LMI5
0.0
GTEX-WRHK-0626-SM-4MVOE
0.0
GTEX-YEC3-1426-101806-SM-5PNXX
0.0
GTEX-ZVP2-1626-SM-5GU5D
0.0
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STOMACH - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.