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RBMXL1

GENERAL INFORMATION

Gene name

 RBMXL1

Gene description

 RNA binding motif protein, X-linked-like 1

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Ubiquitous nuclear expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene.

Reliability score

 Supported based on 1 antibody.
HPA057707
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Pancreas

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 RBMXL1 (HGNC Symbol)

Synonyms

 KAT3

Description

 RNA binding motif protein, X-linked-like 1 (HGNC Symbol)

Entrez gene summary

 This gene represents a retrogene of RNA binding motif protein, X-linked (RBMX), which is located on chromosome X. While all introns in the coding sequence have been processed out compared to the RBMX locus, the ORF is intact and there is specific evidence for transcription at this location. The preservation of the ORF by purifying selection in all Old World monkeys carrying it suggests that this locus is likely to be functional, possibly during male meiosis when X chromosomal genes are silenced or during haploid stages of spermatogenesis. This gene shares 5' exon structure with the cysteine conjugate-beta lyase 2 locus on chromosome 1, but the coding sequences are non-overlapping. Alternative splicing results in two transcript variants. [provided by RefSeq, Jun 2009]

Chromosome

 1

Cytoband

 p22.2

Chromosome location (bp)

 88979456 - 88992960

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000213516 (version 83.38)

Entrez gene

 494115

UniProt

 Q96E39 (UniProt - Evidence at protein level)

neXtProt

 NX_Q96E39

Antibodypedia

 RBMXL1 antibodies

PROTEIN BROWSER
RBMXL1-001
RBMXL1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
RBMXL1-001
ENSP00000318415
ENST00000321792
Q96E39 [Direct mapping]
RNA binding motif protein, X-linked-like-1 RNA binding motif protein, X-linked-like-1, N-terminally processed
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005634 [nucleus]
GO:0006397 [mRNA processing]
GO:0008380 [RNA splicing]
GO:0030529 [ribonucleoprotein complex]
Show all
 390 aa
42.1 kDa 		No 0
RBMXL1-201
ENSP00000446099
ENST00000399794
Q96E39 [Direct mapping]
RNA binding motif protein, X-linked-like-1 RNA binding motif protein, X-linked-like-1, N-terminally processed
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005634 [nucleus]
GO:0006397 [mRNA processing]
GO:0008380 [RNA splicing]
GO:0030529 [ribonucleoprotein complex]
Show all
 390 aa
42.1 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.