Tissue expression of REPIN1 - Summary - The Human Protein Atlas

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REPIN1

TISSUE

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CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	REPIN1
Gene description	Replication initiator 1
Protein class	Predicted intracellular proteins Predicted secreted proteins
Predicted localization	Intracellular,Secreted
Number of transcripts	11
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Nuclear and nucleolar expression in several tissues.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA036022
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

Urinary bladder

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	REPIN1 (HGNC Symbol)
Synonyms	AP4, H_DJ0584D14.12, RIP60, Zfp464, ZNF464
Description	Replication initiator 1 (HGNC Symbol)
Entrez gene summary
Chromosome	7
Cytoband	q36.1
Chromosome location (bp)	150368189 - 150374044
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000214022 (version 83.38)
Entrez gene	29803
UniProt	Q9BWE0 (UniProt - Evidence at protein level)
neXtProt	NX_Q9BWE0
Antibodypedia	REPIN1 antibodies

PROTEIN BROWSER

REPIN1-001	REPIN1-002	REPIN1-004	REPIN1-006	REPIN1-011	REPIN1-012	REPIN1-014	REPIN1-016	REPIN1-018	REPIN1-201	REPIN1-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
REPIN1-001 ENSP00000420578 ENST00000479668	C9J590 [Direct mapping] Replication initiator 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all		136 aa 15.3 kDa	Yes	0
REPIN1-002 ENSP00000417291 ENST00000489432	Q9BWE0 [Direct mapping] Replication initiator 1 Show all	Phobius predicted secreted proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005664 [nuclear origin of replication recognition complex] GO:0005811 [lipid particle] GO:0005829 [cytosol] GO:0006260 [DNA replication] GO:0022626 [cytosolic ribosome] GO:0031965 [nuclear membrane] GO:0044822 [poly(A) RNA binding] GO:0046872 [metal ion binding] GO:2000191 [regulation of fatty acid transport] GO:2001273 [regulation of glucose import in response to insulin stimulus] Show all	624 aa 69.9 kDa	No	0
REPIN1-004 ENSP00000418507 ENST00000466559	C9J0L4 [Direct mapping] Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		55 aa 6.1 kDa	No	0
REPIN1-006 ENSP00000417982 ENST00000482680	C9J590 [Direct mapping] Replication initiator 1 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all		136 aa 15.3 kDa	Yes	0
REPIN1-011 ENSP00000419789 ENST00000475514	C9JZE3 [Direct mapping] Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0046872 [metal ion binding] Show all	366 aa 41.4 kDa	No	0
REPIN1-012 ENSP00000419872 ENST00000488943	C9JYJ8 [Direct mapping] Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003676 [nucleic acid binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0046872 [metal ion binding] Show all	394 aa 44.1 kDa	No	0
REPIN1-014 ENSP00000428562 ENST00000519397	E7EVL6 [Direct mapping] Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0046872 [metal ion binding] Show all	146 aa 16.1 kDa	No	0
REPIN1-016 ENSP00000428129 ENST00000518514	E5RK52 [Direct mapping] Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		136 aa 13.6 kDa	No	0
REPIN1-018 ENSP00000388287 ENST00000425389	Q9BWE0 [Direct mapping] Replication initiator 1 A0A090N8H1 [Target identity:100%; Query identity:100%] HCG1990708, isoform CRA_c; Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005664 [nuclear origin of replication recognition complex] GO:0006260 [DNA replication] GO:0044822 [poly(A) RNA binding] GO:0046872 [metal ion binding] Show all	567 aa 63.6 kDa	No	0
REPIN1-201 ENSP00000380451 ENST00000397281	Q9BWE0 [Direct mapping] Replication initiator 1 A0A090N8H1 [Target identity:100%; Query identity:100%] HCG1990708, isoform CRA_c; Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005664 [nuclear origin of replication recognition complex] GO:0006260 [DNA replication] GO:0044822 [poly(A) RNA binding] GO:0046872 [metal ion binding] Show all	567 aa 63.6 kDa	No	0
REPIN1-202 ENSP00000407714 ENST00000444957	Q9BWE0 [Direct mapping] Replication initiator 1 A0A090N8H1 [Target identity:100%; Query identity:100%] HCG1990708, isoform CRA_c; Replication initiator 1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005664 [nuclear origin of replication recognition complex] GO:0006260 [DNA replication] GO:0044822 [poly(A) RNA binding] GO:0046872 [metal ion binding] Show all	567 aa 63.6 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.