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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:151.5TPM
GTEx:105.7RPKM
FANTOM5:97.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:High
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA039874

 

Antibody CAB014889

 

Antibody CAB026335

 

Adipocytes

High   Not detected   Not detected  

Glandular cells

High   High   High  

Myoepithelial cells

High   Medium   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

151.5

overview Female, age 52
Sample 1
TPM: 181.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 114.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 134.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 175.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

105.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 105.7
Samples: 214

Max RPKM: 198.4
Min RPKM: 69.6
Std RPKM: 22
Median RPKM: 103.2
GTEX-14AS3-1626-SM-5S2OY 198.4
GTEX-ZVT2-1826-SM-5NQ8W 190.2
GTEX-11TT1-2126-SM-5GU5Y 182.8
GTEX-14ABY-2126-SM-5QGQZ 177.3
GTEX-1399U-1826-SM-5PNZ1 166.3
GTEX-145LT-0726-SM-5S2VM 158.9
GTEX-11P82-1326-SM-5HL62 154.0
GTEX-ZYWO-2326-SM-5GZY4 152.0
GTEX-ZXES-0826-SM-5E43C 150.7
GTEX-ZAB4-2526-SM-5HL8M 150.2
GTEX-13D11-1026-SM-5IJFB 148.9
GTEX-133LE-1726-SM-5K7VQ 148.6
GTEX-11EM3-1326-SM-5N9C6 148.0
GTEX-117YX-1426-SM-5H12H 141.3
GTEX-139T8-0826-SM-5L3DE 134.8
GTEX-UTHO-1026-SM-3GAF7 134.7
GTEX-13FHO-0826-SM-5L3E8 134.2
GTEX-T2IS-1526-SM-32QPR 133.8
GTEX-QEL4-2126-SM-447AE 132.8
GTEX-TMMY-0726-SM-33HBE 131.8
GTEX-T6MO-0326-SM-32QOK 131.2
GTEX-Y5LM-1726-SM-4VDSX 131.0
GTEX-ZVE2-1226-SM-5NQ8R 131.0
GTEX-S4UY-0726-SM-4AD6X 130.4
GTEX-11WQC-1726-SM-5GU4W 130.1
GTEX-13W3W-1226-SM-5LU4H 129.0
GTEX-1211K-1926-SM-5EQLB 128.9
GTEX-XYKS-1326-SM-4BRUN 128.3
GTEX-131YS-0626-SM-5EGKL 127.6
GTEX-T5JW-2026-SM-4DM63 127.4
GTEX-12ZZX-1126-SM-5EGKB 126.8
GTEX-XOT4-0726-SM-4GIAW 125.7
GTEX-12WSK-2226-SM-5GCO5 125.6
GTEX-ZLFU-2126-SM-4WWEV 125.2
GTEX-UJHI-1426-SM-3DB9C 124.8
GTEX-13N11-1726-SM-5J1OJ 124.7
GTEX-11PRG-0826-SM-5EQ6A 124.0
GTEX-WXYG-2226-SM-4E3IM 123.4
GTEX-Y114-2026-SM-4TT7L 123.3
GTEX-SE5C-2126-SM-4BRUJ 122.7
GTEX-Y3IK-2326-SM-4WWDT 122.3
GTEX-11EQ9-1826-SM-5Q5AJ 122.1
GTEX-1192X-2326-SM-5987X 121.6
GTEX-Y8LW-1626-SM-5IFHX 121.0
GTEX-131XW-0726-SM-5EGK3 120.3
GTEX-XUZC-1626-SM-4BRVP 120.0
GTEX-Y8E4-1626-SM-5S2MW 119.9
GTEX-ZTX8-1226-SM-4YCE9 119.9
GTEX-11I78-2226-SM-5PNYA 119.1
GTEX-U3ZN-1926-SM-4DXSG 118.1
GTEX-11P7K-0726-SM-5EGKX 118.0
GTEX-132Q8-1426-SM-5EGK7 118.0
GTEX-W5X1-2326-SM-3GIL6 118.0
GTEX-ZYW4-0826-SM-5GIDG 117.8
GTEX-Y9LG-1426-SM-5IFJZ 117.5
GTEX-ZY6K-1626-SM-5GZWV 117.5
GTEX-ZAJG-0626-SM-5HL8X 117.4
GTEX-S341-1526-SM-4AD6K 116.5
GTEX-XUJ4-1926-SM-4BOOV 116.2
GTEX-YB5K-1626-SM-5IFIN 116.0
GTEX-ZTTD-1026-SM-51MRD 115.7
GTEX-ZYT6-0126-SM-5E45J 115.6
GTEX-13CF3-2126-SM-5IFJP 115.3
GTEX-XV7Q-2326-SM-4BRVZ 114.8
GTEX-12KS4-0126-SM-5Q5A5 114.3
GTEX-XGQ4-0926-SM-4AT4U 114.3
GTEX-11DZ1-0326-SM-5N9BN 113.8
GTEX-QDT8-0626-SM-48TYW 113.1
GTEX-13NZB-2126-SM-5MR4Y 112.9
GTEX-ZQUD-1926-SM-51MSA 111.5
GTEX-X15G-1626-SM-3NMB3 111.0
GTEX-XUW1-2326-SM-4BOO5 110.7
GTEX-ZA64-1526-SM-5CVMD 110.7
GTEX-XMD1-0826-SM-4AT52 109.9
GTEX-13PL6-2926-SM-5L3I2 109.8
GTEX-ZVTK-0326-SM-51MRR 109.8
GTEX-XQ3S-1326-SM-4BOPQ 109.5
GTEX-13113-1726-SM-5GCOO 109.2
GTEX-S4Q7-1126-SM-4AD6R 109.2
GTEX-145MN-1926-SM-5SIAI 109.1
GTEX-S4P3-1326-SM-4AD6V 109.0
GTEX-WYVS-1726-SM-3NMAY 108.9
GTEX-VUSG-2226-SM-4KKZO 108.3
GTEX-11DXZ-1926-SM-5GZZL 108.2
GTEX-ZPIC-1126-SM-5BC7F 107.7
GTEX-WY7C-2726-SM-3NB3P 106.9
GTEX-ZF2S-2026-SM-5E461 106.8
GTEX-11P81-1926-SM-5BC53 106.6
GTEX-U3ZH-1426-SM-4DXSR 106.6
GTEX-ZV6S-1826-SM-5NQ8D 106.5
GTEX-Q2AG-0326-SM-48U1O 106.4
GTEX-WYJK-1326-SM-3NB2T 105.9
GTEX-ZF29-1926-SM-5S2P1 105.5
GTEX-Y5V5-2126-SM-4WWFO 105.2
GTEX-YFC4-1426-SM-5IFJG 105.1
GTEX-ZC5H-2626-SM-5J2MG 105.1
GTEX-13O3O-0826-SM-5K7WE 104.5
GTEX-11EMC-2026-SM-5A5JV 104.4
GTEX-RWS6-1926-SM-47JXY 104.4
GTEX-ZZ64-1226-SM-5E43R 104.4
GTEX-PSDG-1626-SM-48TCQ 104.3
GTEX-ZVT4-1026-SM-57WC4 104.3
GTEX-13S86-1226-SM-5S2OA 104.0
GTEX-Y3I4-1526-SM-4TT7K 103.7
GTEX-QVJO-1826-SM-447C9 103.6
GTEX-ZV7C-1826-SM-5NQ83 103.6
GTEX-111YS-1926-SM-5GICC 103.4
GTEX-1122O-1226-SM-5H113 103.0
GTEX-13O3P-0826-SM-5L3DH 102.9
GTEX-ZLV1-1426-SM-4WWES 102.6
GTEX-XBED-1626-SM-47JYN 102.4
GTEX-ZZPU-0626-SM-5E43T 102.2
GTEX-S32W-2026-SM-4AD6E 102.1
GTEX-X4EP-2926-SM-3P5YQ 101.9
GTEX-ZEX8-2226-SM-57WC6 101.9
GTEX-13O61-1826-SM-5KM4I 101.5
GTEX-11ONC-2126-SM-5HL6E 100.6
GTEX-139TU-0626-SM-5KM3X 100.5
GTEX-YB5E-1726-SM-5IFJ3 99.9
GTEX-U412-1826-SM-4DXTJ 99.7
GTEX-1117F-2826-SM-5GZXL 98.6
GTEX-ZQG8-0726-SM-5P9H9 98.4
GTEX-145MO-0826-SM-5NQBL 97.9
GTEX-SIU7-1626-SM-4BRUK 97.8
GTEX-1314G-1226-SM-5BC6D 97.3
GTEX-11GSO-1926-SM-5A5K3 97.1
GTEX-12BJ1-1826-SM-5HL9N 96.9
GTEX-R55D-0826-SM-48FEA 96.7
GTEX-UPK5-2326-SM-3P5Z8 96.7
GTEX-X261-0626-SM-3NMD9 96.6
GTEX-U8XE-0826-SM-4E3J1 96.4
GTEX-TKQ1-0226-SM-33HB5 96.1
GTEX-T2YK-2226-SM-32QPT 95.6
GTEX-YFCO-1826-SM-4W1YH 95.5
GTEX-TML8-1226-SM-32QON 95.3
GTEX-13FTY-2226-SM-5J1ND 94.9
GTEX-13QIC-2326-SM-5LU5N 94.5
GTEX-REY6-2426-SM-48FF5 94.4
GTEX-ZVZQ-0826-SM-51MRF 94.2
GTEX-13FTX-1126-SM-5N9EN 94.0
GTEX-ZT9W-2026-SM-51MRA 93.9
GTEX-11LCK-2426-SM-5HL5F 93.5
GTEX-139T6-1626-SM-5PNYZ 93.3
GTEX-12WSN-1326-SM-5GCNT 93.1
GTEX-13CF2-2026-SM-5K7VI 93.1
GTEX-144GM-0926-SM-5O994 93.1
GTEX-R53T-1526-SM-48FEK 93.1
GTEX-XMD2-0926-SM-4WWEF 92.9
GTEX-WOFL-0826-SM-3MJG1 92.8
GTEX-12WSB-0626-SM-59HJO 92.5
GTEX-13PVQ-1026-SM-5KM3M 92.4
GTEX-XMK1-1126-SM-4IHJ8 92.3
GTEX-WYBS-0926-SM-3NM94 92.2
GTEX-ZDXO-0126-SM-5S2ND 92.1
GTEX-11DXY-2326-SM-5GICW 91.7
GTEX-11WQK-2426-SM-5GU5C 91.7
GTEX-13FTW-1426-SM-5LZWZ 91.7
GTEX-ZDYS-1126-SM-5K7UB 91.7
GTEX-145ME-1526-SM-5Q5F2 91.6
GTEX-11ZTT-2326-SM-5EQLG 91.4
GTEX-132AR-0826-SM-5EGK6 91.3
GTEX-ZU9S-1926-SM-5NQBP 90.9
GTEX-T6MN-0726-SM-32PML 90.2
GTEX-QMRM-1626-SM-4R1KV 90.1
GTEX-QEG5-0726-SM-4R1JQ 89.8
GTEX-XQ8I-2426-SM-4WAXY 89.5
GTEX-Y5V6-2126-SM-4WWFX 88.8
GTEX-132NY-0826-SM-5K7Y7 88.4
GTEX-WRHU-0326-SM-3MJFY 88.4
GTEX-T5JC-2126-SM-32PMO 87.9
GTEX-TKQ2-1826-SM-33HB2 87.5
GTEX-ZDTT-2126-SM-5S2OJ 87.4
GTEX-11NV4-2026-SM-5N9DG 87.3
GTEX-X4XY-0926-SM-4E3JD 87.3
GTEX-11TUW-1826-SM-5BC5D 87.1
GTEX-11ZUS-0826-SM-5FQUY 86.9
GTEX-WI4N-1426-SM-3LK7H 86.9
GTEX-13NZ9-1026-SM-5MR5K 86.5
GTEX-13OW5-2226-SM-5L3HC 85.9
GTEX-RUSQ-2026-SM-4GIAK 84.8
GTEX-S33H-0326-SM-4AD6N 84.7
GTEX-RU72-0626-SM-46MUI 84.5
GTEX-12WSM-1726-SM-5BC6J 84.1
GTEX-Y111-2026-SM-4SOJA 83.6
GTEX-YEC3-1026-SM-5IFI5 83.5
GTEX-147F4-2826-SM-5NQBN 83.4
GTEX-11GS4-2126-SM-5A5KR 83.3
GTEX-S7SE-0826-SM-4AT4D 83.1
GTEX-11EI6-0626-SM-5985T 83.0
GTEX-11NSD-0926-SM-5N9DR 83.0
GTEX-146FH-0826-SM-5SI8T 82.4
GTEX-13W46-0826-SM-5LU3H 81.8
GTEX-13OW8-0226-SM-5K7UP 81.6
GTEX-144GL-2026-SM-5LU3O 81.5
GTEX-ZYFC-0826-SM-5E44K 81.2
GTEX-13O3Q-2226-SM-5KM4O 79.5
GTEX-13NZ8-0126-SM-5IJCT 79.3
GTEX-ZUA1-1526-SM-59HLS 79.1
GTEX-11OF3-1926-SM-59889 78.4
GTEX-11DXW-0626-SM-5N9ER 78.2
GTEX-VJWN-0726-SM-3GIJ8 78.2
GTEX-1269C-2426-SM-5FQSN 78.1
GTEX-WFON-1826-SM-3GILG 77.8
GTEX-1313W-0826-SM-5EQ4T 77.3
GTEX-ZWKS-2826-SM-5NQ74 76.5
GTEX-R55F-1726-SM-2TF4R 75.4
GTEX-ZF3C-2326-SM-5S2MZ 74.8
GTEX-117XS-1926-SM-5GICO 74.6
GTEX-11O72-2126-SM-5N9FO 72.3
GTEX-R3RS-0626-SM-48FE1 72.1
GTEX-YJ8O-2226-SM-5IFHW 72.0
GTEX-13N1W-0626-SM-5MR4U 71.6
GTEX-14E6E-1326-SM-5S2NR 69.8
GTEX-14753-2426-SM-5LU8U 69.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

97.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 97.8
FF:10080-102A8 77 years, female 97.8

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