Tissue expression of VPS16 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	13.3	TPM
GTEx:	11.2	RPKM
FANTOM5:	13.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA043229	Antibody HPA048661
Squamous epithelial cells	High	High

ESOPHAGUS - HPA RNA-seq

Average TPM	13.3

Female, age 70

Sample 1
TPM: 13.0

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 13.8

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 13.2

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	11.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 11.2

Samples: 286

Max RPKM: 29.3
Min RPKM: 5.2
Std RPKM: 2.5
Median RPKM: 10.8

GTEX-ZZPT-1426-SM-5N9C5

29.3

GTEX-12WSA-1426-SM-5EGJU

20.7

GTEX-13X6I-1026-SM-5LU4C

19.7

GTEX-X585-1226-SM-46MW7

17.4

GTEX-R45C-1226-SM-48FEE

17.3

GTEX-ZVE2-1326-SM-5NQ94

17.2

GTEX-144FL-2726-SM-5O98Z

17.0

GTEX-11DZ1-2026-SM-5A5KG

16.9

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	13.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 13.2

FF:10015-101C6

68,74,75 years, mixed

13.2