Tissue expression of NBPF1 - Staining in skin - The Human Protein Atlas

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NBPF1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Skin
	Extended skin samples

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	3.2	TPM
GTEx:	2.3	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Medium
Langerhans:	Medium
Melanocytes:	Medium

Antibody staining	Antibody HPA038748		Antibody HPA042595		Antibody HPA043105		Antibody HPA043692		Antibody HPA044023		Antibody HPA046971		Antibody HPA058050
Fibroblasts	Medium		Not detected		Not detected		Not detected		Medium		Not detected		Not detected
Keratinocytes	Medium		Not detected		Not detected		Not detected		Low		Not detected		Not detected
Langerhans	Medium		Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Melanocytes	Medium		Medium		Not detected		Not detected		Medium		Not detected		Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA038748		Antibody HPA042595		Antibody HPA043105		Antibody HPA043692		Antibody HPA044023		Antibody HPA058050
Epidermal cells	Medium		Not detected		Not detected		Not detected		Low		Not detected

SKIN - HPA RNA-seq

Average TPM	3.2

overview

Female, age 34

Sample 1
TPM: 2.0

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 5.0

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 2.4

SKIN - GTEx RNA-seq

Average RPKM	2.3

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 2.5

Samples: 250

Max RPKM: 7.1
Min RPKM: 0.5
Std RPKM: 1
Median RPKM: 2.4

GTEX-13X6H-0926-SM-5SIB2

7.1

GTEX-ZVTK-0226-SM-51MRG

6.5

GTEX-1314G-1326-SM-5BC6E

6.3

GTEX-111YS-1526-SM-5GZYW

5.5

GTEX-13N11-2326-SM-5IJBF

5.0

GTEX-Y5V5-0126-SM-5S2NW

5.0

GTEX-13FLV-0126-SM-5K7WT

4.8

GTEX-131XE-1626-SM-5K7VO

4.7

Show all

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 2.1

Samples: 357

Max RPKM: 6.1
Min RPKM: 0.4
Std RPKM: 0.9
Median RPKM: 2

GTEX-X638-0126-SM-47JZ8

6.1

GTEX-Q2AG-0126-SM-33HBV

5.2

GTEX-ZC5H-0226-SM-4WAY9

5.1

GTEX-1192X-0226-SM-5H12D

5.0

GTEX-147GR-0526-SM-5S2MY

5.0

GTEX-ZUA1-0126-SM-5GU76

5.0

GTEX-SSA3-0126-SM-32QPU

4.9

GTEX-139T4-0226-SM-5HL5S

4.6

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.