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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:287.9RPKM
FANTOM5:152.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA043234

 

Antibody CAB009526

 

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

287.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 287.9
Samples: 117

Max RPKM: 2409.4
Min RPKM: 17.2
Std RPKM: 420
Median RPKM: 135.6
GTEX-145MG-0011-R5b-SM-5S2VU 2409.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 2185.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 1876.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 1819.2
GTEX-RVPU-0011-R5A-SM-2XCAD 1226.9
GTEX-1477Z-0011-R5b-SM-5PNUO 1221.8
GTEX-13FHP-0011-R5b-SM-5LZY2 1196.9
GTEX-N7MT-0011-R5a-SM-2I3G6 927.0
GTEX-11H98-0011-R5b-SM-57WCF 886.5
GTEX-1445S-0011-R5a-SM-5PNUS 810.2
GTEX-OHPN-0011-R5A-SM-2I5FF 801.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 769.3
GTEX-11UD1-0011-R5b-SM-5P9FP 710.1
GTEX-13CZV-0011-R5a-SM-5K7XA 581.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 577.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 494.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 469.2
GTEX-13JVG-0011-R5a-SM-5MR4O 468.9
GTEX-13NYS-0011-R5a-SM-5MR4D 448.2
GTEX-ZVT3-0011-R5a-SM-51MSI 445.3
GTEX-OXRN-0011-R5A-SM-2I5EF 444.2
GTEX-QVJO-0011-R5A-SM-2S1QM 441.5
GTEX-145LS-0011-R5a-SM-5SI65 441.4
GTEX-X261-0011-R5A-SM-3NMB4 336.9
GTEX-UTHO-0011-R5A-SM-3GIJD 333.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 320.8
GTEX-RVPV-0011-R5A-SM-2TF69 315.6
GTEX-Z93S-0011-R5b-SM-4RGNI 304.5
GTEX-NL4W-0011-R5a-SM-2I3GD 289.9
GTEX-S7SE-0011-R5A-SM-2XCDA 248.2
GTEX-13FXS-0011-R5b-SM-5LZYE 245.0
GTEX-QMR6-0011-R5A-SM-32PKT 237.6
GTEX-S7PM-0011-R5A-SM-3NM8G 227.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 217.6
GTEX-NL3H-0011-R5a-SM-2I3GB 211.9
GTEX-ZE7O-0011-R5a-SM-57WBO 210.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 207.1
GTEX-11NV4-0011-R5a-SM-5NQ88 206.4
GTEX-YJ89-0011-R5a-SM-4V6GM 206.2
GTEX-13X6I-0011-R5a-SM-5PNWW 201.2
GTEX-T6MN-0011-R5A-SM-32QPD 194.1
GTEX-11GSP-0011-R5a-SM-57WBE 193.2
GTEX-ZUA1-0011-R5b-SM-51MTG 189.9
GTEX-XOTO-0011-R5A-SM-4B657 188.4
GTEX-P44H-0011-R5A-SM-2XCEX 187.3
GTEX-WWYW-0011-R5A-SM-3NB3E 183.2
GTEX-ZV68-0011-R5a-SM-4YCDW 181.9
GTEX-12WSD-0011-R5b-SM-5CVNG 181.5
GTEX-13NZA-0011-R5b-SM-5KM4K 179.9
GTEX-R55E-0011-R5A-SM-2TC5N 179.2
GTEX-12WSF-0011-R5a-SM-5HL8K 175.5
GTEX-139T8-0011-R5b-SM-5J1MO 173.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 170.6
GTEX-13OW7-0011-R5b-SM-5O9DM 169.9
GTEX-13SLX-0011-R5a-SM-5O9BV 168.3
GTEX-RU72-0011-R5A-SM-2TF6U 154.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 143.8
GTEX-TSE9-0011-R5A-SM-3DB7J 138.2
GTEX-X4XX-0011-R5A-SM-46MWN 135.6
GTEX-13CIG-0011-R5b-SM-5L3F2 134.5
GTEX-13JUV-0011-R5a-SM-5LZY5 133.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 130.8
GTEX-132Q8-0011-R5a-SM-5IJDM 129.3
GTEX-14ABY-0011-R5b-SM-5SI7B 128.5
GTEX-144GO-0011-R5a-SM-5PNUR 127.6
GTEX-T5JC-0011-R5A-SM-32PLK 122.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 117.1
GTEX-13S7M-0011-R5b-SM-5P9HS 111.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 111.0
GTEX-1399T-0011-R5b-SM-5IJDK 108.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 106.9
GTEX-144GL-0011-R5b-SM-5PNUJ 105.2
GTEX-YFC4-0011-R5a-SM-4RGLR 103.0
GTEX-13X6J-0011-R5b-SM-5PNWT 101.2
GTEX-13OVH-0011-R5b-SM-5KM4L 100.5
GTEX-WZTO-0011-R5B-SM-3NMC5 98.6
GTEX-13VXU-0011-R5a-SM-5O9D7 96.2
GTEX-13FLW-0011-R5a-SM-5LZX6 94.0
GTEX-13CF2-0011-R5a-SM-5LZWS 93.7
GTEX-12WSH-0011-R5b-SM-5P9F3 92.8
GTEX-ZXG5-0011-R5b-SM-57WBN 92.0
GTEX-1313W-0011-R5b-SM-5L3EP 87.0
GTEX-XMD1-0011-R5A-SM-4AT47 85.9
GTEX-N7MS-0011-R5a-SM-2HMK8 80.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 79.3
GTEX-14BIM-0011-R5b-SM-5S2RM 78.7
GTEX-13X6K-0011-R5b-SM-5PNUE 77.9
GTEX-NPJ7-0011-R5a-SM-33HBK 77.2
GTEX-14BIN-0011-R5b-SM-5SI78 75.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 75.3
GTEX-139TT-0011-R5b-SM-5K7W8 74.8
GTEX-WVLH-0011-R5A-SM-3MJFW 74.2
GTEX-13OW6-0011-R5a-SM-5O9BK 72.3
GTEX-13OW5-0011-R5b-SM-5L3FR 72.0
GTEX-145MH-0011-R5a-SM-5P9JT 67.2
GTEX-12WSA-0011-R5b-SM-5GU5I 66.8
GTEX-11OF3-0011-R5a-SM-57WB4 64.9
GTEX-WL46-0011-R5A-SM-3LK6V 64.2
GTEX-12WSB-0011-R5b-SM-5GU67 63.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 62.5
GTEX-13112-0011-R5b-SM-5DUV8 61.4
GTEX-13OVL-0011-R5b-SM-5L3FU 53.3
GTEX-139TS-0011-R5b-SM-5J2MZ 51.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 48.9
GTEX-T2IS-0011-R5A-SM-32QP4 42.1
GTEX-13FLV-0011-R5a-SM-5LZWT 37.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 36.3
GTEX-PVOW-0011-R5A-SM-32PL7 34.0
GTEX-X585-0011-R5A-SM-46MVI 33.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 29.1
GTEX-12WSC-0011-R5b-SM-5CVNS 28.9
GTEX-13G51-0011-R5a-SM-5L3EB 27.5
GTEX-11WQC-0011-R5a-SM-5BC74 24.8
GTEX-13NYB-0011-R5a-SM-5MR45 22.8
GTEX-131YS-0011-R5b-SM-5K7YB 20.3
GTEX-13O3O-0011-R5b-SM-5KM44 19.7
GTEX-12ZZX-0011-R5a-SM-5HL89 17.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

152.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 152.7
FF:10379-105H1 89 years, female 251.4
FF:10164-103B2 76 years, female 54.0

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