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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:85.2TPM
GTEx:159.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA043234

 

Antibody CAB009526

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

85.2

N/A Male, age 5
Sample 1
TPM: 120.5
overview Female, age 40
Sample 2
TPM: 74.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 60.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

159.2

GTEx sample id

RPKM

37.972.7141.07.3262.202004006008001,0001,2001,4001,600
 
37.972.7141.07.3262.202004006008001,0001,2001,4001,600

Brain - Cortex

Brain - Cortex
RPKM: 154.7
Samples: 114

Max RPKM: 1792.9
Min RPKM: 7.3
Std RPKM: 269.4
Median RPKM: 72.6
GTEX-13OVJ-2826-SM-5L3GW 1792.9
GTEX-1445S-3026-SM-5O9BR 1707.6
GTEX-1192X-3126-SM-5N9BY 1086.7
GTEX-11ONC-2926-SM-5P9JM 897.5
GTEX-QVUS-2826-SM-3GADB 690.1
GTEX-12ZZW-2926-SM-5LZUP 482.0
GTEX-QVJO-1426-SM-2S1QY 458.7
GTEX-11TTK-2926-SM-5PNYP 419.5
GTEX-NPJ8-1526-SM-2D7VU 415.2
GTEX-144FL-3026-SM-5O99C 410.6
GTEX-11EMC-3226-SM-5EGKW 408.2
GTEX-PWO3-0926-SM-2I5EY 350.5
GTEX-145MG-3026-SM-5RQJA 319.0
GTEX-13QIC-2926-SM-5J2NF 306.9
GTEX-132Q8-3026-SM-5PNVG 262.2
GTEX-145MF-2726-SM-5O995 257.0
GTEX-131XW-3126-SM-5LZUC 256.9
GTEX-13FHO-3026-SM-5J1O9 224.8
GTEX-OXRN-2426-SM-2I5EQ 204.0
GTEX-1117F-3226-SM-5N9CT 181.4
GTEX-139T8-1026-SM-5J2MC 178.4
GTEX-145LS-3126-SM-5Q5BY 168.0
GTEX-13JUV-2926-SM-5LZX7 165.8
GTEX-13NYS-3126-SM-5KLYV 163.4
GTEX-13OW8-2826-SM-5L3GC 162.6
GTEX-13X6J-3026-SM-5Q5CU 153.8
GTEX-WHSE-3026-SM-3P5ZH 151.9
GTEX-XOTO-3026-SM-4B65M 150.4
GTEX-Q2AG-2926-SM-2HMJ3 141.4
GTEX-144GL-3026-SM-5Q5CW 139.8
GTEX-13X6K-2926-SM-5Q5D5 138.9
GTEX-ZE7O-3126-SM-5HL5X 137.5
GTEX-11GSP-3226-SM-5986O 135.6
GTEX-14A5I-2926-SM-5Q5CQ 124.5
GTEX-12WSD-3126-SM-5HL7P 118.5
GTEX-1128S-2726-SM-5H12C 114.3
GTEX-11O72-2926-SM-5BC4V 112.8
GTEX-11WQK-3026-SM-5EQL6 112.6
GTEX-1399T-3026-SM-5KLZC 111.9
GTEX-ZZPT-3026-SM-5GZXH 110.8
GTEX-UTHO-3026-SM-3GAFB 109.3
GTEX-X4XX-3026-SM-3NMB2 109.0
GTEX-T5JC-2426-SM-3NMDB 106.5
GTEX-13FXS-3126-SM-5J2NN 102.2
GTEX-13IVO-2926-SM-5L3CZ 101.8
GTEX-11GS4-3126-SM-5A5LH 99.9
GTEX-13OVH-3026-SM-5MR4N 95.6
GTEX-13JVG-3126-SM-5L3FH 94.0
GTEX-13PL6-3126-SM-5LUAR 91.3
GTEX-NPJ7-2726-SM-2I3FT 89.1
GTEX-WWYW-3126-SM-3NB39 87.0
GTEX-13S7M-3126-SM-5RQJQ 84.0
GTEX-13PVQ-3026-SM-5SI93 79.9
GTEX-13SLX-3126-SM-5S2Q5 77.4
GTEX-13NYC-2826-SM-5K7WR 76.1
GTEX-11NV4-2126-SM-5N9DS 75.3
GTEX-WZTO-2926-SM-3NM9I 73.7
GTEX-N7MT-1126-SM-5SI7V 71.6
GTEX-T2IS-3026-SM-32QPM 69.5
GTEX-13O3Q-2926-SM-5KM45 64.0
GTEX-ZUA1-3026-SM-59HJC 63.8
GTEX-XLM4-3026-SM-4AT6L 61.7
GTEX-QMR6-1426-SM-32PLA 61.1
GTEX-T6MN-2626-SM-32PMQ 61.0
GTEX-11OF3-2926-SM-5HL78 60.2
GTEX-Y8DK-0826-SM-4TT3T 58.4
GTEX-RU72-3026-SM-5SI7Y 58.0
GTEX-11EI6-3026-SM-5GZZO 57.2
GTEX-Z93S-2926-SM-57WB9 55.4
GTEX-WVLH-3026-SM-3MJG9 55.0
GTEX-147GR-3026-SM-5S2ML 51.6
GTEX-12ZZZ-3026-SM-5BC67 49.8
GTEX-PVOW-2526-SM-2XCF7 48.1
GTEX-ZVT3-3026-SM-5E43N 47.7
GTEX-13FLW-1426-SM-5K7YE 46.9
GTEX-YJ89-3026-SM-5IFJI 45.8
GTEX-1313W-3126-SM-5LZUI 45.4
GTEX-YFC4-3126-SM-5PNV6 44.6
GTEX-117XS-3026-SM-5N9CA 44.5
GTEX-12WSH-3026-SM-5CVNI 42.5
GTEX-13VXU-2926-SM-5LU5C 42.0
GTEX-TSE9-3026-SM-3DB76 40.9
GTEX-11OC5-0726-SM-5P9JK 39.7
GTEX-ZAJG-3126-SM-5HL9J 38.9
GTEX-14BMV-3026-SM-5S2PQ 38.6
GTEX-QDT8-2926-SM-32PKC 37.7
GTEX-ZAK1-3026-SM-5S2MJ 35.0
GTEX-12126-1026-SM-5P9JJ 34.2
GTEX-12WSA-2926-SM-5EQ4D 33.5
GTEX-111FC-3126-SM-5GZZ2 33.1
GTEX-R55F-1326-SM-5S2V4 33.1
GTEX-11GSO-2926-SM-5HL73 32.8
GTEX-13OW7-3026-SM-5L3GY 31.4
GTEX-X585-3026-SM-46MWF 31.2
GTEX-RNOR-2326-SM-2TF4I 31.0
GTEX-ZYFD-3026-SM-5E44C 30.4
GTEX-11PRG-2926-SM-5987A 28.6
GTEX-WL46-2926-SM-3LK82 27.8
GTEX-131YS-3126-SM-5KLYT 27.6
GTEX-13G51-3026-SM-5IJB8 24.3
GTEX-14ASI-3026-SM-5S2PN 23.5
GTEX-145MH-3026-SM-5Q5DZ 22.9
GTEX-12ZZY-3026-SM-5GCOU 21.4
GTEX-11ZUS-2926-SM-5FQSL 19.3
GTEX-12WSC-3026-SM-5GCNF 19.3
GTEX-Y111-2726-SM-4TT3N 19.0
GTEX-13FHP-3026-SM-5IJBS 14.2
GTEX-11DXW-1126-SM-5H12Q 13.5
GTEX-13O3O-3126-SM-5KM3H 13.2
GTEX-11NUK-2926-SM-5A5MD 13.0
GTEX-13OW6-3026-SM-5J2MI 11.8
GTEX-11DXY-3226-SM-5GIDE 11.3
GTEX-12ZZX-2926-SM-5GCOQ 10.1
GTEX-13NYB-3026-SM-5IJD7 7.3
Show all
37.089.9189.55.1405.901002003004005006007008009001,0001,100
 
37.089.9189.55.1405.901002003004005006007008009001,0001,100

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 164.1
Samples: 108

Max RPKM: 1128.5
Min RPKM: 5.1
Std RPKM: 206.5
Median RPKM: 89.9
GTEX-1445S-0011-R10a-SM-5PNWB 1128.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 1082.5
GTEX-11ZUS-0011-R10b-SM-5BC79 768.6
GTEX-1477Z-0011-R10b-SM-5S2RF 710.7
GTEX-11H98-0011-R10b-SM-5NQ98 698.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 666.8
GTEX-13SLW-0011-R10a-SM-5S2UI 643.9
GTEX-X4EP-0011-R10B-SM-4QASJ 558.1
GTEX-14753-0011-R10b-SM-5S2WE 510.6
GTEX-145MG-0011-R10a-SM-5PNWG 405.9
GTEX-S7SE-0011-R10A-SM-2XCDF 352.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 321.3
GTEX-13FHO-0011-R10b-SM-5J2MM 308.8
GTEX-131XW-0011-R10a-SM-5DUVA 296.4
GTEX-13QIC-0011-R10a-SM-5O9C7 292.6
GTEX-13CZV-0011-R10b-SM-5LZYD 285.8
GTEX-X261-0011-R10B-SM-4E3JT 282.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 276.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 267.5
GTEX-NL4W-0011-R10A-SM-2I3DY 258.8
GTEX-RVPU-0011-R10A-SM-2XCAH 258.3
GTEX-QVUS-0011-R10A-SM-3GIK3 251.9
GTEX-147F4-0011-R10b-SM-5S2WC 246.8
GTEX-P44H-0011-R10A-SM-2XCEK 214.5
GTEX-11WQK-0011-R10a-SM-5BC6R 198.8
GTEX-13X6I-0011-R10a-SM-5PNWI 194.7
GTEX-OXRO-0011-R10A-SM-2I5EH 190.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 189.2
GTEX-13NYS-0011-R10a-SM-5MR4S 183.7
GTEX-145LS-0011-R10a-SM-5PNUQ 175.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 173.9
GTEX-OXRN-0011-R10A-SM-2I5GC 163.5
GTEX-14BIL-0011-R10a-SM-5SI75 162.5
GTEX-13JVG-0011-R10b-SM-5KM2P 161.8
GTEX-13IVO-0011-R10a-SM-5LZY3 158.9
GTEX-ZUA1-0011-R10a-SM-51MT6 158.0
GTEX-ZF28-0011-R10a-SM-4WWEH 150.4
GTEX-ZV68-0011-R10a-SM-51MT7 147.7
GTEX-QMR6-0011-R10A-SM-32PKO 146.0
GTEX-13NZA-0011-R10b-SM-5KM54 142.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 141.6
GTEX-N7MT-0011-R10A-SM-2I3E1 136.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 135.9
GTEX-12WSF-0011-R10a-SM-5LZVH 135.6
GTEX-ZVT3-0011-R10b-SM-57WB6 127.0
GTEX-12WSD-0011-R10b-SM-5GU79 126.4
GTEX-XMD1-0011-R10A-SM-4AT4A 119.5
GTEX-13QJC-0011-R10a-SM-5SI63 110.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 103.0
GTEX-T5JC-0011-R10A-SM-32PM2 100.3
GTEX-ZXG5-0011-R10a-SM-57WDD 99.0
GTEX-13OW8-0011-R10a-SM-5L3H6 96.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 94.5
GTEX-13SLX-0011-R10a-SM-5P9HV 91.2
GTEX-13JUV-0011-R10b-SM-5LZXR 88.6
GTEX-13FXS-0011-R10a-SM-5J2MA 84.3
GTEX-145LU-0011-R10a-SM-5PNWJ 81.4
GTEX-N7MS-0011-R10A-SM-2HMJK 80.4
GTEX-Z93S-0011-R10a-SM-4RGNM 79.9
GTEX-NL3H-0011-R10A-SM-2I3E9 79.8
GTEX-WWYW-0011-R10A-SM-3NB35 79.6
GTEX-X4XX-0011-R10B-SM-46MWO 75.8
GTEX-T6MN-0011-R10A-SM-32QP7 74.2
GTEX-TSE9-0011-R10A-SM-3DB7O 72.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 72.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 69.8
GTEX-13X6J-0011-R10b-SM-5PNWA 67.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 66.5
GTEX-13S7M-0011-R10b-SM-5PNZB 58.2
GTEX-12WSA-0011-R10b-SM-5P9ET 56.1
GTEX-WL46-0011-R10A-SM-3MJFQ 53.5
GTEX-147GR-0011-R10b-SM-5S2UM 51.0
GTEX-13G51-0011-R10b-SM-5LZYF 49.0
GTEX-13X6K-0011-R10a-SM-5P9JR 49.0
GTEX-13O3O-0011-R10a-SM-5LUA9 47.8
GTEX-XLM4-0011-R10A-SM-4AT5P 47.1
GTEX-YJ89-0011-R10a-SM-4SOK9 46.2
GTEX-WVLH-0011-R10A-SM-3MJFM 43.1
GTEX-12WSE-0011-R10b-SM-5P9JV 42.6
GTEX-13FLW-0011-R10b-SM-5LZZF 37.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 37.7
GTEX-145MH-0011-R10b-SM-5PNUK 34.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 33.3
GTEX-139TS-0011-R10a-SM-5K7TU 31.4
GTEX-11WQC-0011-R10a-SM-57WCT 31.1
GTEX-YFC4-0011-R10a-SM-4SOK5 30.9
GTEX-WZTO-0011-R10B-SM-4E3KB 30.6
GTEX-13OW7-0011-R10a-SM-5L3H3 29.1
GTEX-1313W-0011-R10b-SM-5DUXA 28.8
GTEX-QDT8-0011-R10A-SM-32PKG 28.1
GTEX-X585-0011-R10A-SM-46MUY 28.1
GTEX-12WSM-0011-R10a-SM-5DUWV 28.0
GTEX-131YS-0011-R10b-SM-5EQ5N 27.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 27.1
GTEX-12WSC-0011-R10a-SM-5GU57 26.2
GTEX-12WSH-0011-R10a-SM-5LZUS 26.0
GTEX-131XH-0011-R10a-SM-5EGLJ 24.8
GTEX-13O3Q-0011-R10b-SM-5KM39 22.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 18.7
GTEX-13OVL-0011-R10a-SM-5L3GS 18.6
GTEX-14BIN-0011-R10a-SM-5S2UA 18.5
GTEX-12126-0011-R10b-SM-5BC6T 16.0
GTEX-13N2G-0011-R10a-SM-5MR34 15.2
GTEX-13N1W-0011-R10b-SM-5MR4H 12.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 10.5
GTEX-13OW6-0011-R10a-SM-5L3HE 10.5
GTEX-13NYB-0011-R10a-SM-5KM43 9.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 5.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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