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C15orf38-AP3S2

GENERAL INFORMATION

Gene name

 C15orf38-AP3S2

Gene description

 C15orf38-AP3S2 readthrough

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 General cytoplasmic expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly not consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

 Uncertain based on 4 antibodies.
HPA040513 , HPA047173 , HPA049270 , HPA052278
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 C15orf38-AP3S2

Synonyms

Description

 C15orf38-AP3S2 readthrough (HGNC Symbol)

Entrez gene summary

 This locus represents naturally occurring read-through transcription between the neighboring C15orf38 (chromosome 15 open reading frame 38) and AP3S2 (adaptor-related protein complex 3, sigma 2 subunit) genes. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Nov 2010]

Chromosome

 15

Cytoband

 q26.1

Chromosome location (bp)

 89834308 - 89912882

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000250021 (version 83.38)

Entrez gene

 100526783

UniProt

neXtProt

Antibodypedia

 C15orf38-AP3S2 antibodies

PROTEIN BROWSER
C15orf38-AP3S2-001
C15orf38-AP3S2-006
C15orf38-AP3S2-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
C15orf38-AP3S2-001
ENSP00000381377
ENST00000398333
A0A0A6YYH1 [Direct mapping]
Protein C15orf38-AP3S2
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Predicted intracellular proteins
Show all
GO:0006810 [transport]
GO:0006886 [intracellular protein transport]
GO:0016192 [vesicle-mediated transport]
GO:0030117 [membrane coat]
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 394 aa
43.9 kDa 		No 0
C15orf38-AP3S2-006
ENSP00000453637
ENST00000559629
H0YMK0 [Direct mapping]
Protein C15orf38-AP3S2
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Predicted intracellular proteins
Show all
GO:0006810 [transport]
GO:0006886 [intracellular protein transport]
GO:0008565 [protein transporter activity]
GO:0016192 [vesicle-mediated transport]
GO:0030117 [membrane coat]
Show all
 184 aa
20.7 kDa 		No 0
C15orf38-AP3S2-007
ENSP00000453100
ENST00000558648
H0YL85 [Direct mapping]
Protein C15orf38-AP3S2
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Predicted intracellular proteins
Show all
GO:0006810 [transport]
GO:0015031 [protein transport]
Show all
 185 aa
20.4 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.