We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HP
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:2.0TPM
GTEx:15.7RPKM
FANTOM5:0.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA047750

 

Antibody CAB003787

 

Adipocytes

Not detected   Not detected  

Glandular cells

Low   Not detected  

Myoepithelial cells

Low   Not detected  
   
   
   

BREAST - HPA RNA-seq

Average TPM

2.0

overview Female, age 52
Sample 1
TPM: 0.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 1.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 1.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 4.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

15.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 15.7
Samples: 214

Max RPKM: 381.5
Min RPKM: 0
Std RPKM: 43
Median RPKM: 3.7
GTEX-X4XY-0926-SM-4E3JD 381.5
GTEX-13FHO-0826-SM-5L3E8 345.0
GTEX-13O3Q-2226-SM-5KM4O 234.0
GTEX-U8XE-0826-SM-4E3J1 169.3
GTEX-132AR-0826-SM-5EGK6 112.1
GTEX-14E6E-1326-SM-5S2NR 107.8
GTEX-Y5V6-2126-SM-4WWFX 106.5
GTEX-S4Q7-1126-SM-4AD6R 94.9
GTEX-139T6-1626-SM-5PNYZ 89.4
GTEX-12BJ1-1826-SM-5HL9N 78.0
GTEX-11LCK-2426-SM-5HL5F 71.1
GTEX-YB5E-1726-SM-5IFJ3 62.1
GTEX-13S86-1226-SM-5S2OA 61.8
GTEX-RUSQ-2026-SM-4GIAK 59.0
GTEX-ZYW4-0826-SM-5GIDG 48.5
GTEX-117YX-1426-SM-5H12H 46.1
GTEX-1211K-1926-SM-5EQLB 42.4
GTEX-146FH-0826-SM-5SI8T 38.0
GTEX-QMRM-1626-SM-4R1KV 37.3
GTEX-132NY-0826-SM-5K7Y7 33.3
GTEX-13O61-1826-SM-5KM4I 31.8
GTEX-145MO-0826-SM-5NQBL 31.7
GTEX-11O72-2126-SM-5N9FO 30.7
GTEX-REY6-2426-SM-48FF5 30.7
GTEX-WY7C-2726-SM-3NB3P 30.3
GTEX-144GM-0926-SM-5O994 27.1
GTEX-ZLFU-2126-SM-4WWEV 23.7
GTEX-ZTX8-1226-SM-4YCE9 23.1
GTEX-ZZ64-1226-SM-5E43R 22.6
GTEX-ZDYS-1126-SM-5K7UB 21.5
GTEX-Y3I4-1526-SM-4TT7K 19.6
GTEX-ZT9W-2026-SM-51MRA 19.6
GTEX-ZDXO-0126-SM-5S2ND 18.6
GTEX-YB5K-1626-SM-5IFIN 17.0
GTEX-14753-2426-SM-5LU8U 16.6
GTEX-11DZ1-0326-SM-5N9BN 16.5
GTEX-T5JW-2026-SM-4DM63 16.4
GTEX-ZY6K-1626-SM-5GZWV 16.3
GTEX-WI4N-1426-SM-3LK7H 16.2
GTEX-WFON-1826-SM-3GILG 16.1
GTEX-11ZTT-2326-SM-5EQLG 15.8
GTEX-SIU7-1626-SM-4BRUK 14.9
GTEX-ZQUD-1926-SM-51MSA 14.9
GTEX-13CF3-2126-SM-5IFJP 14.8
GTEX-ZDTT-2126-SM-5S2OJ 14.7
GTEX-ZV6S-1826-SM-5NQ8D 14.2
GTEX-11TUW-1826-SM-5BC5D 13.8
GTEX-YFCO-1826-SM-4W1YH 13.6
GTEX-U412-1826-SM-4DXTJ 12.9
GTEX-XGQ4-0926-SM-4AT4U 12.9
GTEX-145MN-1926-SM-5SIAI 12.8
GTEX-TKQ2-1826-SM-33HB2 12.8
GTEX-12WSN-1326-SM-5GCNT 12.5
GTEX-12WSM-1726-SM-5BC6J 12.4
GTEX-S33H-0326-SM-4AD6N 11.6
GTEX-Y9LG-1426-SM-5IFJZ 11.3
GTEX-Y114-2026-SM-4TT7L 10.8
GTEX-147F4-2826-SM-5NQBN 10.7
GTEX-ZYWO-2326-SM-5GZY4 10.5
GTEX-11I78-2226-SM-5PNYA 10.1
GTEX-13NZ9-1026-SM-5MR5K 10.0
GTEX-13N1W-0626-SM-5MR4U 9.5
GTEX-X261-0626-SM-3NMD9 8.9
GTEX-WOFL-0826-SM-3MJG1 8.6
GTEX-UTHO-1026-SM-3GAF7 8.5
GTEX-PSDG-1626-SM-48TCQ 8.4
GTEX-QEL4-2126-SM-447AE 8.3
GTEX-13FTX-1126-SM-5N9EN 8.2
GTEX-ZA64-1526-SM-5CVMD 8.1
GTEX-11EQ9-1826-SM-5Q5AJ 8.0
GTEX-ZTTD-1026-SM-51MRD 7.6
GTEX-13NZ8-0126-SM-5IJCT 7.5
GTEX-ZPIC-1126-SM-5BC7F 7.5
GTEX-11GSO-1926-SM-5A5K3 7.1
GTEX-13PVQ-1026-SM-5KM3M 7.1
GTEX-1117F-2826-SM-5GZXL 6.6
GTEX-11P82-1326-SM-5HL62 6.5
GTEX-R55D-0826-SM-48FEA 6.4
GTEX-YEC3-1026-SM-5IFI5 6.4
GTEX-S32W-2026-SM-4AD6E 6.3
GTEX-Y8E4-1626-SM-5S2MW 6.3
GTEX-12KS4-0126-SM-5Q5A5 6.2
GTEX-145LT-0726-SM-5S2VM 6.1
GTEX-WXYG-2226-SM-4E3IM 6.1
GTEX-13FTW-1426-SM-5LZWZ 5.9
GTEX-XMK1-1126-SM-4IHJ8 5.9
GTEX-ZAB4-2526-SM-5HL8M 5.7
GTEX-ZQG8-0726-SM-5P9H9 5.4
GTEX-13D11-1026-SM-5IJFB 5.1
GTEX-YFC4-1426-SM-5IFJG 5.1
GTEX-13QIC-2326-SM-5LU5N 4.9
GTEX-X4EP-2926-SM-3P5YQ 4.9
GTEX-QEG5-0726-SM-4R1JQ 4.8
GTEX-SE5C-2126-SM-4BRUJ 4.8
GTEX-VJWN-0726-SM-3GIJ8 4.8
GTEX-T6MO-0326-SM-32QOK 4.7
GTEX-11TT1-2126-SM-5GU5Y 4.5
GTEX-13W46-0826-SM-5LU3H 4.5
GTEX-1122O-1226-SM-5H113 4.4
GTEX-ZVTK-0326-SM-51MRR 4.4
GTEX-11P81-1926-SM-5BC53 4.3
GTEX-11OF3-1926-SM-59889 4.1
GTEX-11ZUS-0826-SM-5FQUY 4.1
GTEX-133LE-1726-SM-5K7VQ 4.1
GTEX-1399U-1826-SM-5PNZ1 4.0
GTEX-XQ8I-2426-SM-4WAXY 4.0
GTEX-XV7Q-2326-SM-4BRVZ 3.8
GTEX-XQ3S-1326-SM-4BOPQ 3.6
GTEX-XUZC-1626-SM-4BRVP 3.6
GTEX-13W3W-1226-SM-5LU4H 3.5
GTEX-ZAJG-0626-SM-5HL8X 3.5
GTEX-ZV7C-1826-SM-5NQ83 3.5
GTEX-ZC5H-2626-SM-5J2MG 3.4
GTEX-S4UY-0726-SM-4AD6X 3.2
GTEX-ZVT4-1026-SM-57WC4 3.1
GTEX-Y8LW-1626-SM-5IFHX 3.0
GTEX-11EI6-0626-SM-5985T 2.8
GTEX-145ME-1526-SM-5Q5F2 2.7
GTEX-1313W-0826-SM-5EQ4T 2.6
GTEX-R3RS-0626-SM-48FE1 2.6
GTEX-139TU-0626-SM-5KM3X 2.5
GTEX-R53T-1526-SM-48FEK 2.5
GTEX-XUJ4-1926-SM-4BOOV 2.5
GTEX-11NSD-0926-SM-5N9DR 2.4
GTEX-S341-1526-SM-4AD6K 2.4
GTEX-Y3IK-2326-SM-4WWDT 2.4
GTEX-ZYT6-0126-SM-5E45J 2.4
GTEX-ZZPU-0626-SM-5E43T 2.4
GTEX-Q2AG-0326-SM-48U1O 2.3
GTEX-13113-1726-SM-5GCOO 2.2
GTEX-S4P3-1326-SM-4AD6V 2.2
GTEX-QVJO-1826-SM-447C9 2.1
GTEX-TKQ1-0226-SM-33HB5 2.1
GTEX-11NV4-2026-SM-5N9DG 1.9
GTEX-117XS-1926-SM-5GICO 1.8
GTEX-TMMY-0726-SM-33HBE 1.8
GTEX-XUW1-2326-SM-4BOO5 1.8
GTEX-ZVZQ-0826-SM-51MRF 1.8
GTEX-1192X-2326-SM-5987X 1.7
GTEX-YJ8O-2226-SM-5IFHW 1.6
GTEX-1269C-2426-SM-5FQSN 1.5
GTEX-QDT8-0626-SM-48TYW 1.5
GTEX-WYJK-1326-SM-3NB2T 1.5
GTEX-X15G-1626-SM-3NMB3 1.5
GTEX-XBED-1626-SM-47JYN 1.5
GTEX-XMD1-0826-SM-4AT52 1.5
GTEX-XYKS-1326-SM-4BRUN 1.5
GTEX-144GL-2026-SM-5LU3O 1.4
GTEX-ZU9S-1926-SM-5NQBP 1.4
GTEX-11ONC-2126-SM-5HL6E 1.3
GTEX-XMD2-0926-SM-4WWEF 1.3
GTEX-11P7K-0726-SM-5EGKX 1.2
GTEX-12WSB-0626-SM-59HJO 1.2
GTEX-RU72-0626-SM-46MUI 1.2
GTEX-S7SE-0826-SM-4AT4D 1.2
GTEX-ZLV1-1426-SM-4WWES 1.2
GTEX-ZWKS-2826-SM-5NQ74 1.2
GTEX-11EMC-2026-SM-5A5JV 1.1
GTEX-132Q8-1426-SM-5EGK7 1.1
GTEX-RWS6-1926-SM-47JXY 1.1
GTEX-111YS-1926-SM-5GICC 1.0
GTEX-12WSK-2226-SM-5GCO5 1.0
GTEX-1314G-1226-SM-5BC6D 1.0
GTEX-13OW8-0226-SM-5K7UP 1.0
GTEX-14AS3-1626-SM-5S2OY 1.0
GTEX-U3ZN-1926-SM-4DXSG 1.0
GTEX-VUSG-2226-SM-4KKZO 1.0
GTEX-ZF3C-2326-SM-5S2MZ 1.0
GTEX-ZYFC-0826-SM-5E44K 1.0
GTEX-11DXW-0626-SM-5N9ER 0.9
GTEX-U3ZH-1426-SM-4DXSR 0.9
GTEX-UPK5-2326-SM-3P5Z8 0.9
GTEX-Y5LM-1726-SM-4VDSX 0.9
GTEX-ZF2S-2026-SM-5E461 0.9
GTEX-11DXY-2326-SM-5GICW 0.8
GTEX-11EM3-1326-SM-5N9C6 0.8
GTEX-UJHI-1426-SM-3DB9C 0.8
GTEX-11GS4-2126-SM-5A5KR 0.7
GTEX-13O3P-0826-SM-5L3DH 0.7
GTEX-13OW5-2226-SM-5L3HC 0.7
GTEX-WYBS-0926-SM-3NM94 0.7
GTEX-ZEX8-2226-SM-57WC6 0.7
GTEX-ZUA1-1526-SM-59HLS 0.7
GTEX-ZVE2-1226-SM-5NQ8R 0.7
GTEX-ZXES-0826-SM-5E43C 0.7
GTEX-11WQK-2426-SM-5GU5C 0.6
GTEX-13O3O-0826-SM-5K7WE 0.6
GTEX-T2YK-2226-SM-32QPT 0.6
GTEX-ZF29-1926-SM-5S2P1 0.6
GTEX-ZVT2-1826-SM-5NQ8W 0.6
GTEX-11DXZ-1926-SM-5GZZL 0.5
GTEX-WRHU-0326-SM-3MJFY 0.5
GTEX-139T8-0826-SM-5L3DE 0.4
GTEX-13NZB-2126-SM-5MR4Y 0.4
GTEX-TML8-1226-SM-32QON 0.4
GTEX-Y111-2026-SM-4SOJA 0.4
GTEX-13N11-1726-SM-5J1OJ 0.3
GTEX-Y5V5-2126-SM-4WWFO 0.3
GTEX-11PRG-0826-SM-5EQ6A 0.2
GTEX-11WQC-1726-SM-5GU4W 0.2
GTEX-12ZZX-1126-SM-5EGKB 0.2
GTEX-13FTY-2226-SM-5J1ND 0.2
GTEX-14ABY-2126-SM-5QGQZ 0.2
GTEX-R55F-1726-SM-2TF4R 0.2
GTEX-WYVS-1726-SM-3NMAY 0.2
GTEX-131YS-0626-SM-5EGKL 0.1
GTEX-13PL6-2926-SM-5L3I2 0.1
GTEX-T5JC-2126-SM-32PMO 0.1
GTEX-T6MN-0726-SM-32PML 0.1
GTEX-W5X1-2326-SM-3GIL6 0.1
GTEX-XOT4-0726-SM-4GIAW 0.1
GTEX-131XW-0726-SM-5EGK3 0.0
GTEX-13CF2-2026-SM-5K7VI 0.0
GTEX-T2IS-1526-SM-32QPR 0.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 0.0
FF:10080-102A8 77 years, female 0.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.