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AARSD1

GENERAL INFORMATION

Gene name

 AARSD1

Gene description

 Alanyl-tRNA synthetase domain containing 1

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 Cytoplasmic expression at variable levels in several cell types. Most abundant in cells in seminiferus ducts.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.

Reliability score

 Supported based on 3 antibodies.
HPA021408 , HPA022869 , HPA023714
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 AARSD1 (HGNC Symbol)

Synonyms

 MGC2744

Description

 Alanyl-tRNA synthetase domain containing 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 17

Cytoband

 q21.31

Chromosome location (bp)

 42950526 - 42964498

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000266967 (version 83.38)

Entrez gene

 80755

UniProt

 Q9BTE6 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9BTE6

Antibodypedia

 AARSD1 antibodies

PROTEIN BROWSER
AARSD1-001
AARSD1-013

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
AARSD1-001
ENSP00000400870
ENST00000427569
Q9BTE6 [Direct mapping]
Alanyl-tRNA editing protein Aarsd1
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Predicted intracellular proteins
Show all
GO:0000049 [tRNA binding]
GO:0000166 [nucleotide binding]
GO:0002161 [aminoacyl-tRNA editing activity]
GO:0002196 [Ser-tRNA(Ala) hydrolase activity]
GO:0003674 [molecular_function]
GO:0003676 [nucleic acid binding]
GO:0004813 [alanine-tRNA ligase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006419 [alanyl-tRNA aminoacylation]
GO:0006450 [regulation of translational fidelity]
GO:0008150 [biological_process]
GO:0016876 [ligase activity, forming aminoacyl-tRNA and related compounds]
GO:0043039 [tRNA aminoacylation]
GO:0046872 [metal ion binding]
Show all
 412 aa
45.5 kDa 		No 0
AARSD1-013
ENSP00000400735
ENST00000430739
L7N2F4 [Direct mapping]
Alanyl-tRNA-editing protein Aarsd1
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Predicted intracellular proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016876 [ligase activity, forming aminoacyl-tRNA and related compounds]
GO:0043039 [tRNA aminoacylation]
Show all
 140 aa
15.5 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.