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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA APPENDIX

GENE/PROTEIN

Antibody validation


Dictionary

Appendix

Tissue proteome

Appendix

APPENDIX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.8TPM
FANTOM5:23.6Tags Per Million

APPENDIX - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
Lymphoid tissue:Low
 

Antibody staining

Antibody HPA021408

 

Antibody HPA022869

 

Antibody HPA023714

 

Glandular cells

Medium   Not detected   Low  

Lymphoid tissue

Low   Low   Low  
     
     
     

APPENDIX - HPA RNA-seq

Average TPM

18.8

overview Male, age 26
Sample 1
TPM: 16.8
Cell types%
Lymphocytes: 70
Fibroblasts: 15
Smooth muscle cells: 5
Endothelial cells: 5
Other cell types: 5
overview Female, age 37
Sample 2
TPM: 22.4
Cell types%
Lymphocytes: 65
Fibroblasts: 15
Smooth muscle cells: 10
Endothelial cells: 5
Other cell types: 5
overview Female, age 53
Sample 3
TPM: 17.2
Cell types%
Lymphocytes: 75
Fibroblasts: 5
Smooth muscle cells: 5
Endothelial cells: 5
Other cell types: 10

APPENDIX - GTEx RNA-seq

No GTEx RNA-seq analysis found for this gene / tissue


APPENDIX - FANTOM5 CAGE

Average Tags Per Million

23.6

FANTOM5 sample id

Sample description

Tags Per Million

Appendix
Tags Per Million: 23.6
FF:10189-103D9 29 years, male 23.6

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