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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA TONSIL

GENE/PROTEIN

Antibody validation


Dictionary

Tonsil

TONSIL - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.2TPM
FANTOM5:62.6Tags Per Million

TONSIL - Annotated protein expression

Annotated protein
expression

Germinal center cells:High
Non-germinal center cells:High
Squamous epithelial cells:High
 

Antibody staining

Antibody HPA004940

 

Germinal center cells

High  

Non-germinal center cells

High  

Squamous epithelial cells

High  
 
 
 

TONSIL - HPA RNA-seq

Average TPM

18.2

overview Female, age 19
Sample 1
TPM: 23.4
Cell types%
Lymphocytes: 90
Other cell types: 10
overview Male, age 23
Sample 2
TPM: 19.0
Cell types%
Lymphocytes: 90
Other cell types: 10
N/A Female, age 20
Sample 3
TPM: 16.0
N/A Male, age 32
Sample 4
TPM: 14.6
overview Male, age 20
Sample 5
TPM: 18.0
Cell types%
Lymphocytes: 95
Other cell types: 5

TONSIL - GTEx RNA-seq

No GTEx RNA-seq analysis found for this gene / tissue


TONSIL - FANTOM5 CAGE

Average Tags Per Million

62.6

FANTOM5 sample id

Sample description

Tags Per Million

Tonsil
Tags Per Million: 62.6
FF:10047-101G2 22-61 years, mixed 62.6

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