Fields »
ABOUT
HELP
BLOG
CSDE1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:443.5TPM
GTEx:122.9RPKM
FANTOM5:709.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA018846

  

Antibody HPA052221

  

Adipocytes

 Low   Not detected  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 
 

Antibody staining

Antibody HPA018846

  

Antibody HPA052221

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

443.5
N/A Female, age 80
Sample 1
TPM: 395.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 671.7
N/A Female, age 57
Sample 3
TPM: 537.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 333.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 279.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

122.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 129.8
Samples: 350

Max RPKM: 272.7
Min RPKM: 64.6
Std RPKM: 32
Median RPKM: 124.9
GTEX-ZDTT-2626-SM-5S2OP 272.7
GTEX-QLQW-1226-SM-2S1Q9 254.1
GTEX-PWN1-0226-SM-5SI7O 247.3
GTEX-ZZPU-2726-SM-5NQ8O 224.0
GTEX-NFK9-0326-SM-3MJGV 219.4
GTEX-QV31-1326-SM-2S1QE 213.8
GTEX-O5YT-0226-SM-32PK5 211.2
GTEX-WEY5-1926-SM-3GIL8 210.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 112.4
Samples: 227

Max RPKM: 246.4
Min RPKM: 56.9
Std RPKM: 23.6
Median RPKM: 109.3
GTEX-WFJO-1026-SM-3GIKL 246.4
GTEX-ZQUD-0526-SM-57WG4 223.8
GTEX-XAJ8-0226-SM-4GIB2 170.6
GTEX-X585-2526-SM-4QAS1 169.5
GTEX-ZF2S-1526-SM-5S2OO 165.6
GTEX-12WSL-1126-SM-5CVNK 162.2
GTEX-ZF29-0826-SM-5S2NP 161.1
GTEX-W5X1-1426-SM-3GIKH 160.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

709.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 709.8
FF:10010-101C1 65,65,76 years, mixed 709.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.