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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.8TPM
GTEx:7.1RPKM
FANTOM5:5.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
Myoepithelial cells:Not detected
Adipocytes:Not detected
 

Antibody staining

Antibody HPA004252

 

Antibody HPA004472

 

Antibody CAB000011

 

Antibody CAB068180

 

Glandular cells

Not detected   Not detected   Not detected   Not detected  

Myoepithelial cells

Not detected   Not detected   Not detected   Not detected  

Adipocytes

Not detected   Not detected   Not detected  
       
       
       

BREAST - HPA RNA-seq

Average TPM

17.8

overview Female, age 52
Sample 1
TPM: 26.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 19.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 13.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 11.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

7.1

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 7.1
Samples: 214

Max RPKM: 26.1
Min RPKM: 1.5
Std RPKM: 3.8
Median RPKM: 6.3
GTEX-11ONC-2126-SM-5HL6E 26.1
GTEX-11GSO-1926-SM-5A5K3 23.8
GTEX-11ZUS-0826-SM-5FQUY 22.6
GTEX-11O72-2126-SM-5N9FO 20.4
GTEX-ZVZQ-0826-SM-51MRF 20.2
GTEX-139TU-0626-SM-5KM3X 19.4
GTEX-S7SE-0826-SM-4AT4D 18.9
GTEX-WFON-1826-SM-3GILG 15.0
GTEX-117YX-1426-SM-5H12H 14.4
GTEX-Y3I4-1526-SM-4TT7K 14.4
GTEX-ZC5H-2626-SM-5J2MG 14.0
GTEX-Y5V6-2126-SM-4WWFX 13.5
GTEX-132NY-0826-SM-5K7Y7 13.3
GTEX-11OF3-1926-SM-59889 13.2
GTEX-TKQ2-1826-SM-33HB2 12.2
GTEX-ZUA1-1526-SM-59HLS 12.2
GTEX-11NV4-2026-SM-5N9DG 12.1
GTEX-13O3Q-2226-SM-5KM4O 12.0
GTEX-TML8-1226-SM-32QON 11.8
GTEX-ZZPU-0626-SM-5E43T 11.7
GTEX-12BJ1-1826-SM-5HL9N 11.6
GTEX-144GL-2026-SM-5LU3O 11.5
GTEX-146FH-0826-SM-5SI8T 11.3
GTEX-12WSM-1726-SM-5BC6J 11.0
GTEX-117XS-1926-SM-5GICO 10.8
GTEX-13D11-1026-SM-5IJFB 10.8
GTEX-Q2AG-0326-SM-48U1O 10.7
GTEX-13FTW-1426-SM-5LZWZ 10.6
GTEX-ZA64-1526-SM-5CVMD 10.5
GTEX-U3ZN-1926-SM-4DXSG 10.4
GTEX-S33H-0326-SM-4AD6N 10.3
GTEX-XYKS-1326-SM-4BRUN 10.3
GTEX-ZYFC-0826-SM-5E44K 10.1
GTEX-12WSB-0626-SM-59HJO 10.0
GTEX-13O61-1826-SM-5KM4I 10.0
GTEX-QDT8-0626-SM-48TYW 10.0
GTEX-YJ8O-2226-SM-5IFHW 9.9
GTEX-13W46-0826-SM-5LU3H 9.8
GTEX-XBED-1626-SM-47JYN 9.6
GTEX-YFCO-1826-SM-4W1YH 9.6
GTEX-1122O-1226-SM-5H113 9.5
GTEX-YFC4-1426-SM-5IFJG 9.5
GTEX-11P81-1926-SM-5BC53 9.3
GTEX-11PRG-0826-SM-5EQ6A 9.3
GTEX-1269C-2426-SM-5FQSN 9.3
GTEX-UJHI-1426-SM-3DB9C 9.3
GTEX-11WQC-1726-SM-5GU4W 9.2
GTEX-ZF2S-2026-SM-5E461 9.0
GTEX-145LT-0726-SM-5S2VM 8.8
GTEX-U3ZH-1426-SM-4DXSR 8.8
GTEX-ZY6K-1626-SM-5GZWV 8.8
GTEX-11NSD-0926-SM-5N9DR 8.7
GTEX-WXYG-2226-SM-4E3IM 8.6
GTEX-13FHO-0826-SM-5L3E8 8.5
GTEX-13N11-1726-SM-5J1OJ 8.5
GTEX-XQ3S-1326-SM-4BOPQ 8.5
GTEX-1211K-1926-SM-5EQLB 8.2
GTEX-WRHU-0326-SM-3MJFY 8.2
GTEX-ZVT4-1026-SM-57WC4 8.2
GTEX-132AR-0826-SM-5EGK6 8.0
GTEX-13N1W-0626-SM-5MR4U 8.0
GTEX-147F4-2826-SM-5NQBN 7.8
GTEX-ZYW4-0826-SM-5GIDG 7.8
GTEX-XUJ4-1926-SM-4BOOV 7.7
GTEX-Y114-2026-SM-4TT7L 7.7
GTEX-Y5V5-2126-SM-4WWFO 7.7
GTEX-13OW8-0226-SM-5K7UP 7.6
GTEX-SIU7-1626-SM-4BRUK 7.5
GTEX-T2IS-1526-SM-32QPR 7.5
GTEX-ZPIC-1126-SM-5BC7F 7.5
GTEX-11DXZ-1926-SM-5GZZL 7.4
GTEX-13FTY-2226-SM-5J1ND 7.3
GTEX-VUSG-2226-SM-4KKZO 7.3
GTEX-ZAB4-2526-SM-5HL8M 7.3
GTEX-ZWKS-2826-SM-5NQ74 7.3
GTEX-11EI6-0626-SM-5985T 7.2
GTEX-145MN-1926-SM-5SIAI 7.2
GTEX-ZLV1-1426-SM-4WWES 7.2
GTEX-ZV6S-1826-SM-5NQ8D 7.2
GTEX-ZDTT-2126-SM-5S2OJ 7.1
GTEX-11DXW-0626-SM-5N9ER 7.0
GTEX-WI4N-1426-SM-3LK7H 7.0
GTEX-XUW1-2326-SM-4BOO5 7.0
GTEX-11DXY-2326-SM-5GICW 6.9
GTEX-14753-2426-SM-5LU8U 6.9
GTEX-12KS4-0126-SM-5Q5A5 6.8
GTEX-13QIC-2326-SM-5LU5N 6.8
GTEX-W5X1-2326-SM-3GIL6 6.8
GTEX-Y111-2026-SM-4SOJA 6.8
GTEX-ZQG8-0726-SM-5P9H9 6.8
GTEX-ZYT6-0126-SM-5E45J 6.8
GTEX-12WSN-1326-SM-5GCNT 6.7
GTEX-1313W-0826-SM-5EQ4T 6.7
GTEX-13OW5-2226-SM-5L3HC 6.7
GTEX-UPK5-2326-SM-3P5Z8 6.7
GTEX-ZF3C-2326-SM-5S2MZ 6.7
GTEX-13PVQ-1026-SM-5KM3M 6.6
GTEX-R53T-1526-SM-48FEK 6.6
GTEX-TKQ1-0226-SM-33HB5 6.6
GTEX-U8XE-0826-SM-4E3J1 6.6
GTEX-WY7C-2726-SM-3NB3P 6.6
GTEX-WYVS-1726-SM-3NMAY 6.6
GTEX-13O3P-0826-SM-5L3DH 6.5
GTEX-11ZTT-2326-SM-5EQLG 6.4
GTEX-12WSK-2226-SM-5GCO5 6.3
GTEX-Y3IK-2326-SM-4WWDT 6.3
GTEX-YEC3-1026-SM-5IFI5 6.3
GTEX-ZDYS-1126-SM-5K7UB 6.3
GTEX-ZF29-1926-SM-5S2P1 6.3
GTEX-13NZ9-1026-SM-5MR5K 6.2
GTEX-RWS6-1926-SM-47JXY 6.2
GTEX-WYBS-0926-SM-3NM94 6.2
GTEX-XQ8I-2426-SM-4WAXY 6.2
GTEX-XV7Q-2326-SM-4BRVZ 6.2
GTEX-131YS-0626-SM-5EGKL 6.1
GTEX-QEL4-2126-SM-447AE 6.1
GTEX-ZEX8-2226-SM-57WC6 6.1
GTEX-ZT9W-2026-SM-51MRA 6.1
GTEX-ZV7C-1826-SM-5NQ83 6.0
GTEX-139T8-0826-SM-5L3DE 5.9
GTEX-T5JC-2126-SM-32PMO 5.9
GTEX-1192X-2326-SM-5987X 5.8
GTEX-QMRM-1626-SM-4R1KV 5.8
GTEX-ZVTK-0326-SM-51MRR 5.7
GTEX-13O3O-0826-SM-5K7WE 5.6
GTEX-14AS3-1626-SM-5S2OY 5.6
GTEX-Y9LG-1426-SM-5IFJZ 5.6
GTEX-XMK1-1126-SM-4IHJ8 5.5
GTEX-Y8E4-1626-SM-5S2MW 5.5
GTEX-ZU9S-1926-SM-5NQBP 5.5
GTEX-11GS4-2126-SM-5A5KR 5.4
GTEX-13NZB-2126-SM-5MR4Y 5.4
GTEX-S341-1526-SM-4AD6K 5.4
GTEX-WYJK-1326-SM-3NB2T 5.4
GTEX-14E6E-1326-SM-5S2NR 5.3
GTEX-1399U-1826-SM-5PNZ1 5.2
GTEX-14ABY-2126-SM-5QGQZ 5.2
GTEX-T5JW-2026-SM-4DM63 5.2
GTEX-ZXES-0826-SM-5E43C 5.2
GTEX-11LCK-2426-SM-5HL5F 5.1
GTEX-1314G-1226-SM-5BC6D 5.1
GTEX-13PL6-2926-SM-5L3I2 5.1
GTEX-145ME-1526-SM-5Q5F2 5.1
GTEX-QEG5-0726-SM-4R1JQ 5.1
GTEX-R3RS-0626-SM-48FE1 5.1
GTEX-RU72-0626-SM-46MUI 5.1
GTEX-X4EP-2926-SM-3P5YQ 5.1
GTEX-13W3W-1226-SM-5LU4H 5.0
GTEX-T6MN-0726-SM-32PML 5.0
GTEX-ZAJG-0626-SM-5HL8X 5.0
GTEX-11EM3-1326-SM-5N9C6 4.9
GTEX-12ZZX-1126-SM-5EGKB 4.9
GTEX-139T6-1626-SM-5PNYZ 4.9
GTEX-11WQK-2426-SM-5GU5C 4.8
GTEX-145MO-0826-SM-5NQBL 4.8
GTEX-QVJO-1826-SM-447C9 4.8
GTEX-S4P3-1326-SM-4AD6V 4.8
GTEX-TMMY-0726-SM-33HBE 4.8
GTEX-ZQUD-1926-SM-51MSA 4.8
GTEX-WOFL-0826-SM-3MJG1 4.7
GTEX-ZDXO-0126-SM-5S2ND 4.7
GTEX-ZVE2-1226-SM-5NQ8R 4.7
GTEX-ZYWO-2326-SM-5GZY4 4.7
GTEX-11P7K-0726-SM-5EGKX 4.6
GTEX-ZTX8-1226-SM-4YCE9 4.6
GTEX-144GM-0926-SM-5O994 4.5
GTEX-XMD1-0826-SM-4AT52 4.5
GTEX-Y5LM-1726-SM-4VDSX 4.5
GTEX-ZVT2-1826-SM-5NQ8W 4.5
GTEX-13113-1726-SM-5GCOO 4.4
GTEX-R55D-0826-SM-48FEA 4.4
GTEX-XMD2-0926-SM-4WWEF 4.4
GTEX-11EQ9-1826-SM-5Q5AJ 4.3
GTEX-YB5E-1726-SM-5IFJ3 4.3
GTEX-ZTTD-1026-SM-51MRD 4.3
GTEX-1117F-2826-SM-5GZXL 4.2
GTEX-131XW-0726-SM-5EGK3 4.2
GTEX-13CF2-2026-SM-5K7VI 4.2
GTEX-T6MO-0326-SM-32QOK 4.2
GTEX-X15G-1626-SM-3NMB3 4.2
GTEX-ZLFU-2126-SM-4WWEV 4.2
GTEX-R55F-1726-SM-2TF4R 4.1
GTEX-11I78-2226-SM-5PNYA 4.0
GTEX-13S86-1226-SM-5S2OA 4.0
GTEX-RUSQ-2026-SM-4GIAK 4.0
GTEX-S32W-2026-SM-4AD6E 4.0
GTEX-T2YK-2226-SM-32QPT 4.0
GTEX-VJWN-0726-SM-3GIJ8 4.0
GTEX-S4Q7-1126-SM-4AD6R 3.9
GTEX-XOT4-0726-SM-4GIAW 3.9
GTEX-Y8LW-1626-SM-5IFHX 3.8
GTEX-133LE-1726-SM-5K7VQ 3.7
GTEX-13NZ8-0126-SM-5IJCT 3.7
GTEX-UTHO-1026-SM-3GAF7 3.6
GTEX-11EMC-2026-SM-5A5JV 3.4
GTEX-11TT1-2126-SM-5GU5Y 3.4
GTEX-XGQ4-0926-SM-4AT4U 3.4
GTEX-111YS-1926-SM-5GICC 3.3
GTEX-X4XY-0926-SM-4E3JD 3.3
GTEX-REY6-2426-SM-48FF5 3.1
GTEX-13CF3-2126-SM-5IFJP 3.0
GTEX-X261-0626-SM-3NMD9 2.9
GTEX-11DZ1-0326-SM-5N9BN 2.8
GTEX-11TUW-1826-SM-5BC5D 2.8
GTEX-S4UY-0726-SM-4AD6X 2.8
GTEX-SE5C-2126-SM-4BRUJ 2.7
GTEX-PSDG-1626-SM-48TCQ 2.6
GTEX-13FTX-1126-SM-5N9EN 2.5
GTEX-XUZC-1626-SM-4BRVP 2.5
GTEX-U412-1826-SM-4DXTJ 1.9
GTEX-YB5K-1626-SM-5IFIN 1.9
GTEX-132Q8-1426-SM-5EGK7 1.6
GTEX-11P82-1326-SM-5HL62 1.5
GTEX-ZZ64-1226-SM-5E43R 1.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

5.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 5.6
FF:10080-102A8 77 years, female 5.6

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