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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.4TPM
GTEx:0.5RPKM
FANTOM5:3.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA050556

  

Antibody CAB033902

  

Antibody CAB062547

  

Antibody CAB068175

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected   Low   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA005680

  

Antibody HPA050556

  

Antibody CAB033902

  

Antibody CAB062547

  

Antibody CAB068175

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Medium   Not detected   Not detected   Not detected   Not detected  
            
         
         
         

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

1.4
N/A Female, age 80
Sample 1
TPM: 2.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 0.5
N/A Female, age 57
Sample 3
TPM: 1.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 2.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 0.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

RPKM
0.10.20.40.00.80.00.51.01.52.02.53.03.54.04.55.05.56.0
 
0.10.20.40.00.80.00.51.01.52.02.53.03.54.04.55.05.56.0

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 0.4
Samples: 350

Max RPKM: 6.1
Min RPKM: 0
Std RPKM: 0.5
Median RPKM: 0.2
GTEX-POMQ-2326-SM-5S2VS 6.1
GTEX-Q734-1826-SM-2I3EL 3.8
GTEX-PSDG-0326-SM-48TCP 3.7
GTEX-13N11-2626-SM-5K7UQ 2.2
GTEX-QCQG-1826-SM-2S1P2 2.2
GTEX-13JVG-0226-SM-5J1MW 1.9
GTEX-T2IS-0226-SM-32QPH 1.8
GTEX-12ZZX-0226-SM-5DUXU 1.6
Show all
0.10.30.70.01.50.00.51.01.52.02.53.03.54.04.55.05.56.06.5
 
0.10.30.70.01.50.00.51.01.52.02.53.03.54.04.55.05.56.06.5

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 0.6
Samples: 227

Max RPKM: 6.9
Min RPKM: 0
Std RPKM: 0.9
Median RPKM: 0.3
GTEX-Y3I4-0726-SM-4TT7M 6.9
GTEX-ZT9X-0926-SM-5O9C4 5.4
GTEX-13FHO-2026-SM-5J1OA 4.9
GTEX-WY7C-0926-SM-3NB34 4.8
GTEX-UPK5-1826-SM-3GAEB 4.5
GTEX-14753-2526-SM-5LU97 3.6
GTEX-XLM4-1026-SM-4AT51 3.2
GTEX-WOFM-0726-SM-3MJF8 3.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

3.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 3.2
FF:10010-101C1 65,65,76 years, mixed 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.