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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.5TPM
GTEx:6.4RPKM
FANTOM5:20.0Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA005680

  

Antibody HPA050556

  

Antibody CAB033902

  

Antibody CAB062547

  

Antibody CAB068175

  

Squamous epithelial cells

 Medium   Medium   Low   Medium   Medium  
         
         
         

ESOPHAGUS - HPA RNA-seq

Average TPM

11.5
overview Female, age 70
Sample 1
TPM: 13.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 11.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 9.6
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

6.4

GTEx sample id

RPKM
3.95.38.00.513.90246810121416182022242628
 
3.95.38.00.513.90246810121416182022242628

Esophagus - Mucosa
Esophagus - Mucosa
RPKM: 6.4
Samples: 286

Max RPKM: 29
Min RPKM: 0.5
Std RPKM: 4
Median RPKM: 5.3
GTEX-133LE-0626-SM-5IFFJ 29.0
GTEX-RU72-0726-SM-46MUW 28.5
GTEX-TMMY-1126-SM-4DXSX 23.0
GTEX-12WSL-1526-SM-5GCP8 19.9
GTEX-RUSQ-0826-SM-47JWW 19.5
GTEX-146FQ-1026-SM-5LU8I 19.2
GTEX-111YS-0926-SM-5EGGI 18.0
GTEX-13X6H-1326-SM-5LU42 17.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

20.0

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 20.0
FF:10015-101C6 68,74,75 years, mixed 20.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.