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ABCF2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.2TPM
GTEx:12.0RPKM
FANTOM5:18.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA020091

  

Antibody HPA021815

  

Antibody HPA030388

  

Antibody CAB020682

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected  

Fibroblasts

 Medium   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected   Low  

Chondrocytes

 Not detected   Not detected  
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA020091

  

Antibody HPA021815

  

Antibody HPA030388

  

Antibody CAB020682

  

Adipocytes

 Low   Not detected   Not detected  

Fibroblasts

 Medium   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Medium   Not detected   Low  

Chondrocytes

 Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.2
N/A Female, age 80
Sample 1
TPM: 18.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 17.1
N/A Female, age 57
Sample 3
TPM: 12.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 54.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 44.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.4
Samples: 350

Max RPKM: 27
Min RPKM: 6.2
Std RPKM: 3.4
Median RPKM: 10.6
GTEX-T5JW-1726-SM-3GADN 27.0
GTEX-REY6-0326-SM-2TF5A 24.2
GTEX-QEG5-0326-SM-2S1PB 23.5
GTEX-ZYVF-0226-SM-5GIEG 22.7
GTEX-U8XE-0426-SM-3DB91 22.5
GTEX-X8HC-0226-SM-4E3K1 22.3
GTEX-XXEK-2426-SM-4BRUS 22.2
GTEX-X4XY-0326-SM-46MVZ 21.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.1
Samples: 227

Max RPKM: 34.6
Min RPKM: 6.5
Std RPKM: 5
Median RPKM: 11.6
GTEX-ZA64-0926-SM-5HL7H 34.6
GTEX-13QBU-1326-SM-5LU4K 32.4
GTEX-133LE-0926-SM-5P9J1 30.6
GTEX-Y114-1326-SM-4TT9A 29.7
GTEX-Y5LM-0826-SM-4VDSW 28.6
GTEX-13PVQ-2226-SM-5L3G9 27.9
GTEX-ZTSS-1026-SM-5985N 25.7
GTEX-11WQK-1526-SM-5EGKN 25.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.6
FF:10010-101C1 65,65,76 years, mixed 18.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.